Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PSMD4P55036 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PSMD4P55036 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PSMD4P55036 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PSMD4P55036 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PSMD4P55036 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.13■□□□□ 0.33
PSMD4P55036 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PSMD4P55036 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.13■□□□□ 0.33
PSMD4P55036 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PSMD4P55036 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PSMD4P55036 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PSMD4P55036 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PSMD4P55036 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
PSMD4P55036 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.12■□□□□ 0.33
PSMD4P55036 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PSMD4P55036 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PSMD4P55036 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.12■□□□□ 0.33
PSMD4P55036 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.12■□□□□ 0.33
PSMD4P55036 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PSMD4P55036 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PSMD4P55036 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PSMD4P55036 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PSMD4P55036 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PSMD4P55036 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
PSMD4P55036 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PSMD4P55036 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.12■□□□□ 0.33
PSMD4P55036 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.12■□□□□ 0.33
PSMD4P55036 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PSMD4P55036 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PSMD4P55036 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PSMD4P55036 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PSMD4P55036 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.12■□□□□ 0.33
PSMD4P55036 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PSMD4P55036 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.12■□□□□ 0.33
PSMD4P55036 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PSMD4P55036 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.12■□□□□ 0.33
PSMD4P55036 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.12■□□□□ 0.33
PSMD4P55036 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.12■□□□□ 0.33
PSMD4P55036 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.12■□□□□ 0.33
PSMD4P55036 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PSMD4P55036 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.12■□□□□ 0.33
PSMD4P55036 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
PSMD4P55036 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PSMD4P55036 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PSMD4P55036 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PSMD4P55036 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PSMD4P55036 AC126763.1-201ENST00000552015 2118 ntBASIC17.12■□□□□ 0.33
PSMD4P55036 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PSMD4P55036 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PSMD4P55036 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PSMD4P55036 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PSMD4P55036 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PSMD4P55036 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PSMD4P55036 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.11■□□□□ 0.33
PSMD4P55036 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PSMD4P55036 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PSMD4P55036 AL162741.1-201ENST00000565563 1558 ntBASIC17.11■□□□□ 0.33
PSMD4P55036 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
PSMD4P55036 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PSMD4P55036 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PSMD4P55036 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PSMD4P55036 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.11■□□□□ 0.33
PSMD4P55036 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.11■□□□□ 0.33
PSMD4P55036 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PSMD4P55036 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PSMD4P55036 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.11■□□□□ 0.33
PSMD4P55036 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PSMD4P55036 ECEL1P3-201ENST00000427961 737 ntBASIC17.11■□□□□ 0.33
PSMD4P55036 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.11■□□□□ 0.33
PSMD4P55036 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.11■□□□□ 0.33
PSMD4P55036 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.11■□□□□ 0.33
PSMD4P55036 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
PSMD4P55036 AC012306.2-201ENST00000609350 630 ntBASIC17.11■□□□□ 0.33
PSMD4P55036 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.11■□□□□ 0.33
PSMD4P55036 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PSMD4P55036 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PSMD4P55036 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PSMD4P55036 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PSMD4P55036 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PSMD4P55036 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PSMD4P55036 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PSMD4P55036 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.11■□□□□ 0.33
PSMD4P55036 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PSMD4P55036 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PSMD4P55036 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PSMD4P55036 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PSMD4P55036 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PSMD4P55036 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
PSMD4P55036 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.11■□□□□ 0.33
PSMD4P55036 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PSMD4P55036 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PSMD4P55036 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PSMD4P55036 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PSMD4P55036 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PSMD4P55036 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PSMD4P55036 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PSMD4P55036 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PSMD4P55036 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PSMD4P55036 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PSMD4P55036 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms