Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC21.19■□□□□ 0.98
HMGCS2P54868 AC008687.5-201ENST00000593746 558 ntBASIC21.19■□□□□ 0.98
HMGCS2P54868 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGCS2P54868 AL024508.2-201ENST00000607749 1894 ntBASIC21.19■□□□□ 0.98
HMGCS2P54868 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
HMGCS2P54868 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC21.19■□□□□ 0.98
HMGCS2P54868 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGCS2P54868 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
HMGCS2P54868 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGCS2P54868 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGCS2P54868 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGCS2P54868 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HMGCS2P54868 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.19■□□□□ 0.98
HMGCS2P54868 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.18■□□□□ 0.98
HMGCS2P54868 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.18■□□□□ 0.98
HMGCS2P54868 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
HMGCS2P54868 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC21.18■□□□□ 0.98
HMGCS2P54868 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HMGCS2P54868 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HMGCS2P54868 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HMGCS2P54868 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
HMGCS2P54868 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC21.18■□□□□ 0.98
HMGCS2P54868 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMGCS2P54868 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.17■□□□□ 0.98
HMGCS2P54868 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.17■□□□□ 0.98
HMGCS2P54868 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMGCS2P54868 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMGCS2P54868 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HMGCS2P54868 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC21.17■□□□□ 0.98
HMGCS2P54868 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC21.17■□□□□ 0.98
HMGCS2P54868 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMGCS2P54868 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC21.17■□□□□ 0.98
HMGCS2P54868 AL049840.3-201ENST00000602669 611 ntBASIC21.17■□□□□ 0.98
HMGCS2P54868 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC21.17■□□□□ 0.98
HMGCS2P54868 AC243591.1-201ENST00000452967 1364 ntBASIC21.17■□□□□ 0.98
HMGCS2P54868 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HMGCS2P54868 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMGCS2P54868 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMGCS2P54868 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMGCS2P54868 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
HMGCS2P54868 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMGCS2P54868 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMGCS2P54868 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMGCS2P54868 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMGCS2P54868 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMGCS2P54868 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMGCS2P54868 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMGCS2P54868 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HMGCS2P54868 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.16■□□□□ 0.98
HMGCS2P54868 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HMGCS2P54868 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HMGCS2P54868 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
HMGCS2P54868 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HMGCS2P54868 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HMGCS2P54868 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HMGCS2P54868 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
HMGCS2P54868 MYLKP1-201ENST00000509077 1580 ntBASIC21.16■□□□□ 0.98
HMGCS2P54868 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC21.16■□□□□ 0.98
HMGCS2P54868 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HMGCS2P54868 AC112777.1-201ENST00000540175 1423 ntBASIC21.16■□□□□ 0.98
HMGCS2P54868 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HMGCS2P54868 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HMGCS2P54868 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HMGCS2P54868 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
HMGCS2P54868 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC21.16■□□□□ 0.98
HMGCS2P54868 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HMGCS2P54868 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HMGCS2P54868 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC21.16■□□□□ 0.98
HMGCS2P54868 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HMGCS2P54868 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC21.16■□□□□ 0.98
HMGCS2P54868 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HMGCS2P54868 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
HMGCS2P54868 AC018712.1-201ENST00000455767 687 ntBASIC21.16■□□□□ 0.98
HMGCS2P54868 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC21.16■□□□□ 0.98
HMGCS2P54868 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC21.16■□□□□ 0.98
HMGCS2P54868 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC21.16■□□□□ 0.98
HMGCS2P54868 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.16■□□□□ 0.98
HMGCS2P54868 AL355877.3-201ENST00000622820 899 ntBASIC21.16■□□□□ 0.98
HMGCS2P54868 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
HMGCS2P54868 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21.16■□□□□ 0.98
HMGCS2P54868 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HMGCS2P54868 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
HMGCS2P54868 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HMGCS2P54868 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HMGCS2P54868 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HMGCS2P54868 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.15■□□□□ 0.98
HMGCS2P54868 MED16-201ENST00000269814 1199 ntTSL 5 BASIC21.15■□□□□ 0.98
HMGCS2P54868 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HMGCS2P54868 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.15■□□□□ 0.98
HMGCS2P54868 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HMGCS2P54868 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC21.15■□□□□ 0.98
HMGCS2P54868 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HMGCS2P54868 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HMGCS2P54868 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HMGCS2P54868 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HMGCS2P54868 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HMGCS2P54868 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HMGCS2P54868 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HMGCS2P54868 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.15■□□□□ 0.98
HMGCS2P54868 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms