Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
EPHA4P54764 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
EPHA4P54764 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
EPHA4P54764 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.68■□□□□ 0.42
EPHA4P54764 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
EPHA4P54764 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.68■□□□□ 0.42
EPHA4P54764 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
EPHA4P54764 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
EPHA4P54764 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
EPHA4P54764 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
EPHA4P54764 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.68■□□□□ 0.42
EPHA4P54764 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.68■□□□□ 0.42
EPHA4P54764 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.68■□□□□ 0.42
EPHA4P54764 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.68■□□□□ 0.42
EPHA4P54764 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.68■□□□□ 0.42
EPHA4P54764 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.68■□□□□ 0.42
EPHA4P54764 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.68■□□□□ 0.42
EPHA4P54764 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
EPHA4P54764 AL592071.1-201ENST00000611956 408 ntBASIC17.68■□□□□ 0.42
EPHA4P54764 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
EPHA4P54764 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
EPHA4P54764 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
EPHA4P54764 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.68■□□□□ 0.42
EPHA4P54764 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
EPHA4P54764 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
EPHA4P54764 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
EPHA4P54764 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
EPHA4P54764 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
EPHA4P54764 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.67■□□□□ 0.42
EPHA4P54764 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPHA4P54764 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPHA4P54764 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPHA4P54764 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPHA4P54764 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
EPHA4P54764 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPHA4P54764 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPHA4P54764 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPHA4P54764 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
EPHA4P54764 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
EPHA4P54764 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
EPHA4P54764 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.67■□□□□ 0.42
EPHA4P54764 VENTXP7-201ENST00000475503 772 ntBASIC17.67■□□□□ 0.42
EPHA4P54764 AP000867.3-201ENST00000524675 377 ntBASIC17.67■□□□□ 0.42
EPHA4P54764 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
EPHA4P54764 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.67■□□□□ 0.42
EPHA4P54764 AC111152.3-201ENST00000569699 673 ntBASIC17.67■□□□□ 0.42
EPHA4P54764 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPHA4P54764 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
EPHA4P54764 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
EPHA4P54764 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.67■□□□□ 0.42
EPHA4P54764 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPHA4P54764 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EPHA4P54764 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.67■□□□□ 0.42
EPHA4P54764 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
EPHA4P54764 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
EPHA4P54764 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHA4P54764 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.66■□□□□ 0.42
EPHA4P54764 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.66■□□□□ 0.42
EPHA4P54764 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.66■□□□□ 0.42
EPHA4P54764 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
EPHA4P54764 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHA4P54764 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.66■□□□□ 0.42
EPHA4P54764 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.66■□□□□ 0.42
EPHA4P54764 RN7SL606P-201ENST00000472779 293 ntBASIC17.66■□□□□ 0.42
EPHA4P54764 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.66■□□□□ 0.42
EPHA4P54764 Z69720.1-201ENST00000601483 472 ntBASIC17.66■□□□□ 0.42
EPHA4P54764 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.66■□□□□ 0.42
EPHA4P54764 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHA4P54764 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHA4P54764 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHA4P54764 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EPHA4P54764 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EPHA4P54764 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EPHA4P54764 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EPHA4P54764 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EPHA4P54764 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHA4P54764 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
EPHA4P54764 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.65■□□□□ 0.42
EPHA4P54764 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHA4P54764 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHA4P54764 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHA4P54764 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
EPHA4P54764 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EPHA4P54764 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EPHA4P54764 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EPHA4P54764 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
EPHA4P54764 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EPHA4P54764 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.65■□□□□ 0.42
EPHA4P54764 AC246785.2-201ENST00000432512 513 ntBASIC17.65■□□□□ 0.42
EPHA4P54764 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHA4P54764 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
EPHA4P54764 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHA4P54764 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHA4P54764 AC104819.1-201ENST00000504587 486 ntBASIC17.65■□□□□ 0.42
EPHA4P54764 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.65■□□□□ 0.42
EPHA4P54764 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
EPHA4P54764 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.65■□□□□ 0.42
EPHA4P54764 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.65■□□□□ 0.42
EPHA4P54764 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.65■□□□□ 0.42
EPHA4P54764 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms