Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
PDE1AP54750 AL023973.1-201ENST00000624619 620 ntBASIC22.45■■□□□ 1.18
PDE1AP54750 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDE1AP54750 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDE1AP54750 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDE1AP54750 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
PDE1AP54750 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDE1AP54750 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDE1AP54750 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PDE1AP54750 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
PDE1AP54750 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PDE1AP54750 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PDE1AP54750 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PDE1AP54750 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC22.45■■□□□ 1.18
PDE1AP54750 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC22.45■■□□□ 1.18
PDE1AP54750 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PDE1AP54750 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDE1AP54750 AL133373.2-201ENST00000623187 2828 ntBASIC22.44■■□□□ 1.18
PDE1AP54750 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PDE1AP54750 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
PDE1AP54750 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PDE1AP54750 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC22.44■■□□□ 1.18
PDE1AP54750 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
PDE1AP54750 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC22.44■■□□□ 1.18
PDE1AP54750 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PDE1AP54750 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PDE1AP54750 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC22.44■■□□□ 1.18
PDE1AP54750 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC22.44■■□□□ 1.18
PDE1AP54750 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
PDE1AP54750 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PDE1AP54750 P4HB-223ENST00000576390 439 ntTSL 4 BASIC22.44■■□□□ 1.18
PDE1AP54750 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC22.44■■□□□ 1.18
PDE1AP54750 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC22.44■■□□□ 1.18
PDE1AP54750 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC22.44■■□□□ 1.18
PDE1AP54750 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PDE1AP54750 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC22.44■■□□□ 1.18
PDE1AP54750 AC005363.2-201ENST00000618631 242 ntBASIC22.44■■□□□ 1.18
PDE1AP54750 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC22.44■■□□□ 1.18
PDE1AP54750 AL157888.1-201ENST00000631930 593 ntBASIC22.44■■□□□ 1.18
PDE1AP54750 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC22.44■■□□□ 1.18
PDE1AP54750 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PDE1AP54750 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PDE1AP54750 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC22.44■■□□□ 1.18
PDE1AP54750 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDE1AP54750 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC22.43■■□□□ 1.18
PDE1AP54750 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC22.43■■□□□ 1.18
PDE1AP54750 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC22.43■■□□□ 1.18
PDE1AP54750 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PDE1AP54750 LGALS8-AS1-201ENST00000487567 1457 ntBASIC22.43■■□□□ 1.18
PDE1AP54750 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC22.43■■□□□ 1.18
PDE1AP54750 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDE1AP54750 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
PDE1AP54750 AP000523.1-201ENST00000398242 1049 ntBASIC22.43■■□□□ 1.18
PDE1AP54750 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDE1AP54750 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC22.43■■□□□ 1.18
PDE1AP54750 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC22.43■■□□□ 1.18
PDE1AP54750 CD81-212ENST00000526072 1172 ntTSL 5 BASIC22.43■■□□□ 1.18
PDE1AP54750 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC22.43■■□□□ 1.18
PDE1AP54750 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC22.43■■□□□ 1.18
PDE1AP54750 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDE1AP54750 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PDE1AP54750 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC22.43■■□□□ 1.18
PDE1AP54750 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PDE1AP54750 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDE1AP54750 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDE1AP54750 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDE1AP54750 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDE1AP54750 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PDE1AP54750 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC22.43■■□□□ 1.18
PDE1AP54750 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PDE1AP54750 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
PDE1AP54750 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC22.42■■□□□ 1.18
PDE1AP54750 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC22.42■■□□□ 1.18
PDE1AP54750 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PDE1AP54750 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PDE1AP54750 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PDE1AP54750 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC22.42■■□□□ 1.18
PDE1AP54750 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC22.42■■□□□ 1.18
PDE1AP54750 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC22.42■■□□□ 1.18
PDE1AP54750 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC22.42■■□□□ 1.18
PDE1AP54750 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC22.42■■□□□ 1.18
PDE1AP54750 REEP1-209ENST00000541910 969 ntTSL 2 BASIC22.42■■□□□ 1.18
PDE1AP54750 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
PDE1AP54750 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PDE1AP54750 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC22.42■■□□□ 1.18
PDE1AP54750 AC092865.7-201ENST00000641832 219 ntBASIC22.42■■□□□ 1.18
PDE1AP54750 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PDE1AP54750 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PDE1AP54750 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC22.42■■□□□ 1.18
PDE1AP54750 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PDE1AP54750 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
PDE1AP54750 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PDE1AP54750 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC22.42■■□□□ 1.18
PDE1AP54750 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
PDE1AP54750 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PDE1AP54750 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PDE1AP54750 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC22.41■■□□□ 1.18
PDE1AP54750 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC22.41■■□□□ 1.18
PDE1AP54750 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PDE1AP54750 NOC2LP2-201ENST00000407594 1944 ntBASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms