Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP1B3P54709 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATP1B3P54709 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP1B3P54709 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP1B3P54709 KRT8P45-201ENST00000414328 1447 ntBASIC15.97■□□□□ 0.15
ATP1B3P54709 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.97■□□□□ 0.15
ATP1B3P54709 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP1B3P54709 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP1B3P54709 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP1B3P54709 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.97■□□□□ 0.15
ATP1B3P54709 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP1B3P54709 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATP1B3P54709 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
ATP1B3P54709 FAM197Y1-201ENST00000421178 764 ntBASIC15.97■□□□□ 0.15
ATP1B3P54709 SAPCD2P4-201ENST00000424595 1171 ntBASIC15.97■□□□□ 0.15
ATP1B3P54709 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC15.97■□□□□ 0.15
ATP1B3P54709 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
ATP1B3P54709 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.97■□□□□ 0.15
ATP1B3P54709 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
ATP1B3P54709 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.97■□□□□ 0.15
ATP1B3P54709 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
ATP1B3P54709 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATP1B3P54709 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATP1B3P54709 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.97■□□□□ 0.15
ATP1B3P54709 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.97■□□□□ 0.15
ATP1B3P54709 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
ATP1B3P54709 ABALON-201ENST00000629058 1903 ntBASIC15.97■□□□□ 0.15
ATP1B3P54709 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
ATP1B3P54709 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP1B3P54709 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC15.97■□□□□ 0.15
ATP1B3P54709 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP1B3P54709 AC099398.1-201ENST00000567919 2776 ntBASIC15.97■□□□□ 0.15
ATP1B3P54709 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.97■□□□□ 0.15
ATP1B3P54709 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP1B3P54709 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP1B3P54709 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATP1B3P54709 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
ATP1B3P54709 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
ATP1B3P54709 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
ATP1B3P54709 AL499627.1-201ENST00000569373 2188 ntBASIC15.96■□□□□ 0.15
ATP1B3P54709 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATP1B3P54709 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATP1B3P54709 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATP1B3P54709 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATP1B3P54709 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATP1B3P54709 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.96■□□□□ 0.15
ATP1B3P54709 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
ATP1B3P54709 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATP1B3P54709 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
ATP1B3P54709 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC15.96■□□□□ 0.15
ATP1B3P54709 CD177P1-201ENST00000606252 935 ntBASIC15.96■□□□□ 0.15
ATP1B3P54709 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATP1B3P54709 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.96■□□□□ 0.15
ATP1B3P54709 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.96■□□□□ 0.15
ATP1B3P54709 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.96■□□□□ 0.15
ATP1B3P54709 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
ATP1B3P54709 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATP1B3P54709 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
ATP1B3P54709 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATP1B3P54709 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
ATP1B3P54709 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.96■□□□□ 0.14
ATP1B3P54709 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
ATP1B3P54709 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.95■□□□□ 0.14
ATP1B3P54709 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP1B3P54709 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.95■□□□□ 0.14
ATP1B3P54709 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
ATP1B3P54709 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.95■□□□□ 0.14
ATP1B3P54709 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ATP1B3P54709 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.95■□□□□ 0.14
ATP1B3P54709 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.95■□□□□ 0.14
ATP1B3P54709 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP1B3P54709 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP1B3P54709 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ATP1B3P54709 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP1B3P54709 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.95■□□□□ 0.14
ATP1B3P54709 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
ATP1B3P54709 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC15.95■□□□□ 0.14
ATP1B3P54709 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ATP1B3P54709 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC15.95■□□□□ 0.14
ATP1B3P54709 AC142381.4-202ENST00000563973 229 ntBASIC15.95■□□□□ 0.14
ATP1B3P54709 AP001412.1-201ENST00000608405 714 ntBASIC15.95■□□□□ 0.14
ATP1B3P54709 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP1B3P54709 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP1B3P54709 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC15.95■□□□□ 0.14
ATP1B3P54709 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP1B3P54709 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP1B3P54709 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ATP1B3P54709 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.95■□□□□ 0.14
ATP1B3P54709 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
ATP1B3P54709 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ATP1B3P54709 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.95■□□□□ 0.14
ATP1B3P54709 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.95■□□□□ 0.14
ATP1B3P54709 PRORSD1P-202ENST00000563365 2154 ntBASIC15.94■□□□□ 0.14
ATP1B3P54709 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ATP1B3P54709 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATP1B3P54709 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.94■□□□□ 0.14
ATP1B3P54709 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
ATP1B3P54709 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATP1B3P54709 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ATP1B3P54709 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms