Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PMS1P54277 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PMS1P54277 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PMS1P54277 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.23■□□□□ 0.83
PMS1P54277 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PMS1P54277 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PMS1P54277 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
PMS1P54277 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PMS1P54277 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.23■□□□□ 0.83
PMS1P54277 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PMS1P54277 MIR149-201ENST00000384879 89 ntBASIC20.23■□□□□ 0.83
PMS1P54277 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.23■□□□□ 0.83
PMS1P54277 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PMS1P54277 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.23■□□□□ 0.83
PMS1P54277 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PMS1P54277 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PMS1P54277 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PMS1P54277 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.23■□□□□ 0.83
PMS1P54277 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PMS1P54277 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PMS1P54277 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PMS1P54277 AC138932.1-201ENST00000534164 6830 ntBASIC20.23■□□□□ 0.83
PMS1P54277 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.23■□□□□ 0.83
PMS1P54277 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PMS1P54277 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PMS1P54277 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.22■□□□□ 0.83
PMS1P54277 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.22■□□□□ 0.83
PMS1P54277 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PMS1P54277 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PMS1P54277 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PMS1P54277 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PMS1P54277 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.22■□□□□ 0.83
PMS1P54277 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.22■□□□□ 0.83
PMS1P54277 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.22■□□□□ 0.83
PMS1P54277 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PMS1P54277 AP000997.3-201ENST00000623333 2250 ntBASIC20.22■□□□□ 0.83
PMS1P54277 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
PMS1P54277 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PMS1P54277 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PMS1P54277 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PMS1P54277 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PMS1P54277 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.22■□□□□ 0.83
PMS1P54277 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PMS1P54277 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.22■□□□□ 0.83
PMS1P54277 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PMS1P54277 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.22■□□□□ 0.83
PMS1P54277 C2orf69P3-201ENST00000565542 1120 ntBASIC20.22■□□□□ 0.83
PMS1P54277 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.22■□□□□ 0.83
PMS1P54277 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PMS1P54277 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.22■□□□□ 0.83
PMS1P54277 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PMS1P54277 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PMS1P54277 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PMS1P54277 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PMS1P54277 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PMS1P54277 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.21■□□□□ 0.83
PMS1P54277 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PMS1P54277 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PMS1P54277 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.21■□□□□ 0.83
PMS1P54277 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PMS1P54277 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PMS1P54277 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PMS1P54277 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PMS1P54277 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
PMS1P54277 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
PMS1P54277 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PMS1P54277 AL596275.1-201ENST00000423464 877 ntBASIC20.21■□□□□ 0.83
PMS1P54277 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PMS1P54277 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PMS1P54277 EGLN1P1-201ENST00000531623 762 ntBASIC20.21■□□□□ 0.83
PMS1P54277 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.21■□□□□ 0.83
PMS1P54277 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.21■□□□□ 0.83
PMS1P54277 AC010653.2-201ENST00000623505 997 ntBASIC20.21■□□□□ 0.83
PMS1P54277 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PMS1P54277 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.21■□□□□ 0.83
PMS1P54277 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PMS1P54277 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PMS1P54277 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PMS1P54277 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PMS1P54277 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PMS1P54277 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PMS1P54277 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PMS1P54277 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PMS1P54277 AC134043.2-201ENST00000624206 2238 ntBASIC20.21■□□□□ 0.83
PMS1P54277 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.83
PMS1P54277 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PMS1P54277 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PMS1P54277 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PMS1P54277 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PMS1P54277 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PMS1P54277 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PMS1P54277 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.2■□□□□ 0.82
PMS1P54277 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PMS1P54277 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PMS1P54277 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
PMS1P54277 FAM87A-204ENST00000613235 858 ntBASIC20.2■□□□□ 0.82
PMS1P54277 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PMS1P54277 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PMS1P54277 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PMS1P54277 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms