Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18■□□□□ 0.47
CLCNKAP51800 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CLCNKAP51800 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CLCNKAP51800 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLCNKAP51800 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CLCNKAP51800 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18■□□□□ 0.47
CLCNKAP51800 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CLCNKAP51800 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CLCNKAP51800 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18■□□□□ 0.47
CLCNKAP51800 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18■□□□□ 0.47
CLCNKAP51800 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18■□□□□ 0.47
CLCNKAP51800 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18■□□□□ 0.47
CLCNKAP51800 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18■□□□□ 0.47
CLCNKAP51800 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18■□□□□ 0.47
CLCNKAP51800 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18■□□□□ 0.47
CLCNKAP51800 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18■□□□□ 0.47
CLCNKAP51800 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18■□□□□ 0.47
CLCNKAP51800 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18■□□□□ 0.47
CLCNKAP51800 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18■□□□□ 0.47
CLCNKAP51800 AC011498.5-201ENST00000592027 486 ntBASIC18■□□□□ 0.47
CLCNKAP51800 AC069148.1-201ENST00000608741 768 ntBASIC18■□□□□ 0.47
CLCNKAP51800 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCNKAP51800 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CLCNKAP51800 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCNKAP51800 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCNKAP51800 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCNKAP51800 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCNKAP51800 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CLCNKAP51800 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CLCNKAP51800 AC005082.1-201ENST00000413042 2259 ntBASIC18■□□□□ 0.47
CLCNKAP51800 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CLCNKAP51800 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCNKAP51800 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCNKAP51800 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CLCNKAP51800 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCNKAP51800 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCNKAP51800 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CLCNKAP51800 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
CLCNKAP51800 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLCNKAP51800 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCNKAP51800 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLCNKAP51800 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCNKAP51800 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCNKAP51800 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLCNKAP51800 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCNKAP51800 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.99■□□□□ 0.47
CLCNKAP51800 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.99■□□□□ 0.47
CLCNKAP51800 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.99■□□□□ 0.47
CLCNKAP51800 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.99■□□□□ 0.47
CLCNKAP51800 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.99■□□□□ 0.47
CLCNKAP51800 AC024563.2-201ENST00000603282 481 ntBASIC17.99■□□□□ 0.47
CLCNKAP51800 AC093503.3-201ENST00000624917 2352 ntBASIC17.99■□□□□ 0.47
CLCNKAP51800 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCNKAP51800 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCNKAP51800 AC009102.3-201ENST00000623118 1491 ntBASIC17.99■□□□□ 0.47
CLCNKAP51800 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.99■□□□□ 0.47
CLCNKAP51800 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCNKAP51800 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.99■□□□□ 0.47
CLCNKAP51800 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCNKAP51800 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CLCNKAP51800 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.98■□□□□ 0.47
CLCNKAP51800 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCNKAP51800 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLCNKAP51800 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCNKAP51800 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCNKAP51800 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCNKAP51800 KRT18P48-201ENST00000434763 852 ntBASIC17.98■□□□□ 0.47
CLCNKAP51800 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCNKAP51800 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.98■□□□□ 0.47
CLCNKAP51800 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
CLCNKAP51800 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLCNKAP51800 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.98■□□□□ 0.47
CLCNKAP51800 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.98■□□□□ 0.47
CLCNKAP51800 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.98■□□□□ 0.47
CLCNKAP51800 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CLCNKAP51800 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.98■□□□□ 0.47
CLCNKAP51800 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.98■□□□□ 0.47
CLCNKAP51800 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLCNKAP51800 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCNKAP51800 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCNKAP51800 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCNKAP51800 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.98■□□□□ 0.47
CLCNKAP51800 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.98■□□□□ 0.47
CLCNKAP51800 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.98■□□□□ 0.47
CLCNKAP51800 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLCNKAP51800 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCNKAP51800 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLCNKAP51800 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCNKAP51800 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCNKAP51800 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLCNKAP51800 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.97■□□□□ 0.47
CLCNKAP51800 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CLCNKAP51800 AC026471.1-201ENST00000564629 3026 ntBASIC17.97■□□□□ 0.47
CLCNKAP51800 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.97■□□□□ 0.47
CLCNKAP51800 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CLCNKAP51800 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCNKAP51800 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCNKAP51800 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.97■□□□□ 0.47
CLCNKAP51800 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.97■□□□□ 0.47
CLCNKAP51800 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms