Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SLC6A12P48065 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A12P48065 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A12P48065 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC6A12P48065 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
SLC6A12P48065 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A12P48065 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A12P48065 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A12P48065 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A12P48065 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A12P48065 AC138028.4-201ENST00000564984 1845 ntBASIC17.73■□□□□ 0.43
SLC6A12P48065 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A12P48065 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SLC6A12P48065 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC6A12P48065 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A12P48065 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.73■□□□□ 0.43
SLC6A12P48065 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.73■□□□□ 0.43
SLC6A12P48065 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SLC6A12P48065 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC6A12P48065 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SLC6A12P48065 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.73■□□□□ 0.43
SLC6A12P48065 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A12P48065 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC6A12P48065 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC6A12P48065 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.73■□□□□ 0.43
SLC6A12P48065 AC092865.7-201ENST00000641832 219 ntBASIC17.73■□□□□ 0.43
SLC6A12P48065 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
SLC6A12P48065 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A12P48065 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.73■□□□□ 0.43
SLC6A12P48065 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A12P48065 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A12P48065 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A12P48065 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A12P48065 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A12P48065 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A12P48065 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC6A12P48065 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A12P48065 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC6A12P48065 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A12P48065 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC6A12P48065 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SLC6A12P48065 AC093010.1-201ENST00000473625 1624 ntBASIC17.72■□□□□ 0.43
SLC6A12P48065 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A12P48065 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A12P48065 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC6A12P48065 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A12P48065 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A12P48065 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A12P48065 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A12P48065 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A12P48065 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SLC6A12P48065 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A12P48065 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC6A12P48065 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC6A12P48065 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A12P48065 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC6A12P48065 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A12P48065 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC6A12P48065 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A12P48065 AC113347.1-201ENST00000413321 391 ntBASIC17.72■□□□□ 0.43
SLC6A12P48065 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC6A12P48065 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A12P48065 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC6A12P48065 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC6A12P48065 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.72■□□□□ 0.43
SLC6A12P48065 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC6A12P48065 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.72■□□□□ 0.43
SLC6A12P48065 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC6A12P48065 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SLC6A12P48065 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A12P48065 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
SLC6A12P48065 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A12P48065 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A12P48065 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A12P48065 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC6A12P48065 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
SLC6A12P48065 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC6A12P48065 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC6A12P48065 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC6A12P48065 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.71■□□□□ 0.43
SLC6A12P48065 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
SLC6A12P48065 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC6A12P48065 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC6A12P48065 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
SLC6A12P48065 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SLC6A12P48065 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC6A12P48065 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
SLC6A12P48065 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.71■□□□□ 0.43
SLC6A12P48065 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.71■□□□□ 0.43
SLC6A12P48065 GCSHP2-201ENST00000560971 527 ntBASIC17.71■□□□□ 0.43
SLC6A12P48065 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SLC6A12P48065 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC6A12P48065 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SLC6A12P48065 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.71■□□□□ 0.43
SLC6A12P48065 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
SLC6A12P48065 AL157888.1-201ENST00000631930 593 ntBASIC17.71■□□□□ 0.43
SLC6A12P48065 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC6A12P48065 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SLC6A12P48065 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SLC6A12P48065 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms