Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
BRCC3P46736 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
BRCC3P46736 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
BRCC3P46736 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.53■□□□□ 0.72
BRCC3P46736 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
BRCC3P46736 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BRCC3P46736 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
BRCC3P46736 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BRCC3P46736 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
BRCC3P46736 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.52■□□□□ 0.72
BRCC3P46736 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.52■□□□□ 0.72
BRCC3P46736 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BRCC3P46736 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BRCC3P46736 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BRCC3P46736 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BRCC3P46736 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BRCC3P46736 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.52■□□□□ 0.72
BRCC3P46736 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BRCC3P46736 AL845331.1-201ENST00000424978 1190 ntBASIC19.52■□□□□ 0.72
BRCC3P46736 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.52■□□□□ 0.72
BRCC3P46736 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
BRCC3P46736 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
BRCC3P46736 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
BRCC3P46736 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.52■□□□□ 0.72
BRCC3P46736 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BRCC3P46736 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.52■□□□□ 0.72
BRCC3P46736 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
BRCC3P46736 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.52■□□□□ 0.71
BRCC3P46736 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
BRCC3P46736 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
BRCC3P46736 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRCC3P46736 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRCC3P46736 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
BRCC3P46736 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
BRCC3P46736 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
BRCC3P46736 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.51■□□□□ 0.71
BRCC3P46736 TSPY19P-201ENST00000418461 509 ntBASIC19.51■□□□□ 0.71
BRCC3P46736 AC026396.1-201ENST00000419388 421 ntBASIC19.51■□□□□ 0.71
BRCC3P46736 TSPY18P-201ENST00000441642 509 ntBASIC19.51■□□□□ 0.71
BRCC3P46736 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.51■□□□□ 0.71
BRCC3P46736 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRCC3P46736 AC111152.3-201ENST00000569699 673 ntBASIC19.51■□□□□ 0.71
BRCC3P46736 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.51■□□□□ 0.71
BRCC3P46736 AC138894.3-201ENST00000603787 634 ntBASIC19.51■□□□□ 0.71
BRCC3P46736 IFNL4P1-201ENST00000607083 540 ntBASIC19.51■□□□□ 0.71
BRCC3P46736 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.51■□□□□ 0.71
BRCC3P46736 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRCC3P46736 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
BRCC3P46736 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.51■□□□□ 0.71
BRCC3P46736 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.51■□□□□ 0.71
BRCC3P46736 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.51■□□□□ 0.71
BRCC3P46736 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BRCC3P46736 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
BRCC3P46736 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
BRCC3P46736 LINC01126-201ENST00000623515 1646 ntBASIC19.51■□□□□ 0.71
BRCC3P46736 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
BRCC3P46736 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRCC3P46736 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRCC3P46736 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRCC3P46736 RNF165-205ENST00000588679 2904 ntBASIC19.5■□□□□ 0.71
BRCC3P46736 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
BRCC3P46736 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
BRCC3P46736 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
BRCC3P46736 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRCC3P46736 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRCC3P46736 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRCC3P46736 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRCC3P46736 IGHV3-47-201ENST00000425060 335 ntBASIC19.5■□□□□ 0.71
BRCC3P46736 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.5■□□□□ 0.71
BRCC3P46736 KRT17P6-201ENST00000453795 1220 ntBASIC19.5■□□□□ 0.71
BRCC3P46736 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.5■□□□□ 0.71
BRCC3P46736 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.5■□□□□ 0.71
BRCC3P46736 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.5■□□□□ 0.71
BRCC3P46736 Z69720.1-201ENST00000601483 472 ntBASIC19.5■□□□□ 0.71
BRCC3P46736 AC099336.1-202ENST00000602961 463 ntBASIC19.5■□□□□ 0.71
BRCC3P46736 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.5■□□□□ 0.71
BRCC3P46736 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.5■□□□□ 0.71
BRCC3P46736 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.5■□□□□ 0.71
BRCC3P46736 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BRCC3P46736 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
BRCC3P46736 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.5■□□□□ 0.71
BRCC3P46736 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
BRCC3P46736 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
BRCC3P46736 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.5■□□□□ 0.71
BRCC3P46736 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.5■□□□□ 0.71
BRCC3P46736 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRCC3P46736 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRCC3P46736 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRCC3P46736 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.49■□□□□ 0.71
BRCC3P46736 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.49■□□□□ 0.71
BRCC3P46736 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.49■□□□□ 0.71
BRCC3P46736 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRCC3P46736 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BRCC3P46736 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.49■□□□□ 0.71
BRCC3P46736 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
BRCC3P46736 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.49■□□□□ 0.71
BRCC3P46736 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.49■□□□□ 0.71
BRCC3P46736 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.49■□□□□ 0.71
BRCC3P46736 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
BRCC3P46736 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms