Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC12.42□□□□□ -0.42
CXCL5P42830 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CXCL5P42830 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CXCL5P42830 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CXCL5P42830 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CXCL5P42830 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CXCL5P42830 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CXCL5P42830 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CXCL5P42830 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
CXCL5P42830 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC12.42□□□□□ -0.42
CXCL5P42830 NFYC-AS1-201ENST00000606277 1687 ntBASIC12.42□□□□□ -0.42
CXCL5P42830 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CXCL5P42830 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL5P42830 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL5P42830 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC12.41□□□□□ -0.42
CXCL5P42830 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
CXCL5P42830 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL5P42830 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
CXCL5P42830 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC12.41□□□□□ -0.42
CXCL5P42830 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC12.41□□□□□ -0.42
CXCL5P42830 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL5P42830 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
CXCL5P42830 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL5P42830 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL5P42830 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL5P42830 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL5P42830 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL5P42830 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL5P42830 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL5P42830 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL5P42830 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL5P42830 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL5P42830 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC12.41□□□□□ -0.42
CXCL5P42830 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL5P42830 SNCG-201ENST00000348795 684 ntTSL 2 BASIC12.41□□□□□ -0.42
CXCL5P42830 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL5P42830 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL5P42830 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL5P42830 POM121L13P-201ENST00000422362 380 ntBASIC12.41□□□□□ -0.42
CXCL5P42830 CROCCP5-201ENST00000436658 830 ntBASIC12.41□□□□□ -0.42
CXCL5P42830 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL5P42830 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC12.41□□□□□ -0.42
CXCL5P42830 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
CXCL5P42830 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC12.41□□□□□ -0.42
CXCL5P42830 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC12.41□□□□□ -0.42
CXCL5P42830 AL138781.1-201ENST00000566567 1274 ntBASIC12.41□□□□□ -0.42
CXCL5P42830 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL5P42830 VPS53-216ENST00000574029 585 ntTSL 4 BASIC12.41□□□□□ -0.42
CXCL5P42830 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL5P42830 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC12.41□□□□□ -0.42
CXCL5P42830 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL5P42830 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL5P42830 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL5P42830 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CXCL5P42830 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL5P42830 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CXCL5P42830 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC12.41□□□□□ -0.42
CXCL5P42830 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL5P42830 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
CXCL5P42830 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL5P42830 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CXCL5P42830 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC12.4□□□□□ -0.42
CXCL5P42830 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CXCL5P42830 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
CXCL5P42830 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.42
CXCL5P42830 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CXCL5P42830 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CXCL5P42830 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC12.4□□□□□ -0.42
CXCL5P42830 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC12.4□□□□□ -0.42
CXCL5P42830 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
CXCL5P42830 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CXCL5P42830 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CXCL5P42830 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CXCL5P42830 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CXCL5P42830 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC12.4□□□□□ -0.42
CXCL5P42830 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC12.4□□□□□ -0.42
CXCL5P42830 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CXCL5P42830 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC12.4□□□□□ -0.42
CXCL5P42830 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC12.4□□□□□ -0.42
CXCL5P42830 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC12.4□□□□□ -0.42
CXCL5P42830 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC12.4□□□□□ -0.42
CXCL5P42830 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CXCL5P42830 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CXCL5P42830 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
CXCL5P42830 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
CXCL5P42830 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC12.4□□□□□ -0.42
CXCL5P42830 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CXCL5P42830 KRT8P41-201ENST00000533985 1514 ntBASIC12.4□□□□□ -0.42
CXCL5P42830 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CXCL5P42830 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CXCL5P42830 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC12.4□□□□□ -0.42
CXCL5P42830 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CXCL5P42830 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CXCL5P42830 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CXCL5P42830 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC12.4□□□□□ -0.43
CXCL5P42830 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
CXCL5P42830 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC12.4□□□□□ -0.43
CXCL5P42830 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
CXCL5P42830 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
CXCL5P42830 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms