Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 PKD1P1-201ENST00000458669 6805 ntBASIC18.62■□□□□ 0.57
HADHAP40939 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HADHAP40939 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HADHAP40939 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.62■□□□□ 0.57
HADHAP40939 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.62■□□□□ 0.57
HADHAP40939 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.62■□□□□ 0.57
HADHAP40939 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HADHAP40939 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
HADHAP40939 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
HADHAP40939 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HADHAP40939 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HADHAP40939 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HADHAP40939 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
HADHAP40939 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.61■□□□□ 0.57
HADHAP40939 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
HADHAP40939 AC036111.1-201ENST00000533973 1582 ntBASIC18.61■□□□□ 0.57
HADHAP40939 KRT8P7-201ENST00000533003 1432 ntBASIC18.61■□□□□ 0.57
HADHAP40939 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HADHAP40939 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HADHAP40939 AP000593.1-201ENST00000393668 712 ntBASIC18.61■□□□□ 0.57
HADHAP40939 HMGA1P5-201ENST00000412453 271 ntBASIC18.61■□□□□ 0.57
HADHAP40939 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HADHAP40939 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.61■□□□□ 0.57
HADHAP40939 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HADHAP40939 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
HADHAP40939 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.61■□□□□ 0.57
HADHAP40939 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.61■□□□□ 0.57
HADHAP40939 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.61■□□□□ 0.57
HADHAP40939 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HADHAP40939 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
HADHAP40939 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
HADHAP40939 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HADHAP40939 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HADHAP40939 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HADHAP40939 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HADHAP40939 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
HADHAP40939 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.61■□□□□ 0.57
HADHAP40939 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.61■□□□□ 0.57
HADHAP40939 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.6■□□□□ 0.57
HADHAP40939 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.6■□□□□ 0.57
HADHAP40939 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
HADHAP40939 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HADHAP40939 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.6■□□□□ 0.57
HADHAP40939 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.6■□□□□ 0.57
HADHAP40939 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HADHAP40939 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HADHAP40939 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
HADHAP40939 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HADHAP40939 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.6■□□□□ 0.57
HADHAP40939 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.6■□□□□ 0.57
HADHAP40939 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HADHAP40939 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
HADHAP40939 LETM1P2-201ENST00000597330 2178 ntBASIC18.6■□□□□ 0.57
HADHAP40939 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.6■□□□□ 0.57
HADHAP40939 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HADHAP40939 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HADHAP40939 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HADHAP40939 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HADHAP40939 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
HADHAP40939 ECEL1P3-201ENST00000427961 737 ntBASIC18.6■□□□□ 0.57
HADHAP40939 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.6■□□□□ 0.57
HADHAP40939 AC145285.6-201ENST00000604632 637 ntBASIC18.6■□□□□ 0.57
HADHAP40939 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.6■□□□□ 0.57
HADHAP40939 CR769767.2-201ENST00000622735 460 ntBASIC18.6■□□□□ 0.57
HADHAP40939 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HADHAP40939 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.6■□□□□ 0.57
HADHAP40939 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
HADHAP40939 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.6■□□□□ 0.57
HADHAP40939 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.6■□□□□ 0.57
HADHAP40939 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HADHAP40939 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
HADHAP40939 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.6■□□□□ 0.57
HADHAP40939 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HADHAP40939 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.59■□□□□ 0.57
HADHAP40939 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.59■□□□□ 0.57
HADHAP40939 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HADHAP40939 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
HADHAP40939 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.59■□□□□ 0.57
HADHAP40939 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.59■□□□□ 0.57
HADHAP40939 INGX-201ENST00000359239 846 ntBASIC18.59■□□□□ 0.57
HADHAP40939 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HADHAP40939 ECEL1P2-202ENST00000465689 757 ntBASIC18.59■□□□□ 0.57
HADHAP40939 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.59■□□□□ 0.57
HADHAP40939 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HADHAP40939 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.59■□□□□ 0.57
HADHAP40939 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.59■□□□□ 0.57
HADHAP40939 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.59■□□□□ 0.57
HADHAP40939 AL499627.1-201ENST00000569373 2188 ntBASIC18.59■□□□□ 0.57
HADHAP40939 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HADHAP40939 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HADHAP40939 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
HADHAP40939 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
HADHAP40939 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HADHAP40939 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HADHAP40939 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HADHAP40939 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HADHAP40939 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HADHAP40939 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HADHAP40939 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HADHAP40939 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms