Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
HMGCLP35914 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
HMGCLP35914 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMGCLP35914 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
HMGCLP35914 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMGCLP35914 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMGCLP35914 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
HMGCLP35914 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.29■□□□□ 0.52
HMGCLP35914 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.29■□□□□ 0.52
HMGCLP35914 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.29■□□□□ 0.52
HMGCLP35914 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.29■□□□□ 0.52
HMGCLP35914 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMGCLP35914 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.29■□□□□ 0.52
HMGCLP35914 HYMAI.1-201ENST00000620949 238 ntBASIC18.29■□□□□ 0.52
HMGCLP35914 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
HMGCLP35914 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMGCLP35914 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.29■□□□□ 0.52
HMGCLP35914 AC135776.1-201ENST00000319817 2481 ntBASIC18.29■□□□□ 0.52
HMGCLP35914 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMGCLP35914 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMGCLP35914 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMGCLP35914 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMGCLP35914 AC093677.2-201ENST00000600169 1863 ntBASIC18.29■□□□□ 0.52
HMGCLP35914 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.29■□□□□ 0.52
HMGCLP35914 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
HMGCLP35914 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMGCLP35914 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
HMGCLP35914 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMGCLP35914 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMGCLP35914 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMGCLP35914 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMGCLP35914 HBZP1-201ENST00000354915 429 ntBASIC18.28■□□□□ 0.52
HMGCLP35914 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMGCLP35914 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HMGCLP35914 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.28■□□□□ 0.52
HMGCLP35914 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HMGCLP35914 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HMGCLP35914 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.28■□□□□ 0.52
HMGCLP35914 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.28■□□□□ 0.52
HMGCLP35914 AC008687.5-201ENST00000593746 558 ntBASIC18.28■□□□□ 0.52
HMGCLP35914 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.28■□□□□ 0.52
HMGCLP35914 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.28■□□□□ 0.52
HMGCLP35914 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMGCLP35914 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
HMGCLP35914 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
HMGCLP35914 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.28■□□□□ 0.52
HMGCLP35914 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMGCLP35914 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMGCLP35914 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HMGCLP35914 AC135050.7-201ENST00000624508 2218 ntBASIC18.27■□□□□ 0.52
HMGCLP35914 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HMGCLP35914 LINC01126-201ENST00000623515 1646 ntBASIC18.27■□□□□ 0.52
HMGCLP35914 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HMGCLP35914 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HMGCLP35914 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HMGCLP35914 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
HMGCLP35914 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.27■□□□□ 0.52
HMGCLP35914 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.27■□□□□ 0.52
HMGCLP35914 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HMGCLP35914 AC092597.1-201ENST00000487352 616 ntBASIC18.27■□□□□ 0.52
HMGCLP35914 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.27■□□□□ 0.52
HMGCLP35914 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.27■□□□□ 0.52
HMGCLP35914 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.27■□□□□ 0.52
HMGCLP35914 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HMGCLP35914 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HMGCLP35914 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HMGCLP35914 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.27■□□□□ 0.51
HMGCLP35914 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.27■□□□□ 0.51
HMGCLP35914 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
HMGCLP35914 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
HMGCLP35914 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HMGCLP35914 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCLP35914 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCLP35914 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
HMGCLP35914 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HMGCLP35914 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCLP35914 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCLP35914 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCLP35914 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCLP35914 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HMGCLP35914 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCLP35914 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCLP35914 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCLP35914 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCLP35914 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.26■□□□□ 0.51
HMGCLP35914 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.26■□□□□ 0.51
HMGCLP35914 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCLP35914 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCLP35914 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCLP35914 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.26■□□□□ 0.51
HMGCLP35914 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCLP35914 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCLP35914 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCLP35914 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.26■□□□□ 0.51
HMGCLP35914 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.26■□□□□ 0.51
HMGCLP35914 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCLP35914 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCLP35914 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HMGCLP35914 KRT89P-201ENST00000620027 1478 ntBASIC18.26■□□□□ 0.51
HMGCLP35914 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms