Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.46■□□□□ 0.39
RORAP35398 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.46■□□□□ 0.38
RORAP35398 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.46■□□□□ 0.38
RORAP35398 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
RORAP35398 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RORAP35398 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RORAP35398 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.45■□□□□ 0.38
RORAP35398 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RORAP35398 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RORAP35398 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RORAP35398 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RORAP35398 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RORAP35398 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RORAP35398 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RORAP35398 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RORAP35398 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.45■□□□□ 0.38
RORAP35398 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.45■□□□□ 0.38
RORAP35398 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RORAP35398 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.45■□□□□ 0.38
RORAP35398 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RORAP35398 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.45■□□□□ 0.38
RORAP35398 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.45■□□□□ 0.38
RORAP35398 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RORAP35398 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.45■□□□□ 0.38
RORAP35398 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.45■□□□□ 0.38
RORAP35398 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RORAP35398 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
RORAP35398 AP002414.4-201ENST00000589764 1148 ntBASIC17.45■□□□□ 0.38
RORAP35398 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RORAP35398 AC012313.10-201ENST00000623509 926 ntBASIC17.45■□□□□ 0.38
RORAP35398 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
RORAP35398 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RORAP35398 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RORAP35398 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RORAP35398 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.45■□□□□ 0.38
RORAP35398 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RORAP35398 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RORAP35398 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
RORAP35398 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RORAP35398 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RORAP35398 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.45■□□□□ 0.38
RORAP35398 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RORAP35398 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RORAP35398 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RORAP35398 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.45■□□□□ 0.38
RORAP35398 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RORAP35398 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RORAP35398 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RORAP35398 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RORAP35398 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.44■□□□□ 0.38
RORAP35398 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RORAP35398 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RORAP35398 AP000974.1-201ENST00000623909 2387 ntBASIC17.44■□□□□ 0.38
RORAP35398 Z83836.1-201ENST00000624605 1642 ntBASIC17.44■□□□□ 0.38
RORAP35398 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RORAP35398 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RORAP35398 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RORAP35398 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RORAP35398 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RORAP35398 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RORAP35398 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RORAP35398 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RORAP35398 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RORAP35398 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RORAP35398 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.44■□□□□ 0.38
RORAP35398 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.44■□□□□ 0.38
RORAP35398 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.44■□□□□ 0.38
RORAP35398 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.44■□□□□ 0.38
RORAP35398 AC009065.1-201ENST00000564055 1225 ntBASIC17.44■□□□□ 0.38
RORAP35398 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.44■□□□□ 0.38
RORAP35398 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RORAP35398 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RORAP35398 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RORAP35398 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RORAP35398 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RORAP35398 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.44■□□□□ 0.38
RORAP35398 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RORAP35398 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.44■□□□□ 0.38
RORAP35398 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.44■□□□□ 0.38
RORAP35398 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RORAP35398 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RORAP35398 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RORAP35398 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.44■□□□□ 0.38
RORAP35398 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RORAP35398 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RORAP35398 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RORAP35398 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.43■□□□□ 0.38
RORAP35398 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RORAP35398 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RORAP35398 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RORAP35398 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.43■□□□□ 0.38
RORAP35398 AP003733.1-201ENST00000491725 852 ntBASIC17.43■□□□□ 0.38
RORAP35398 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.43■□□□□ 0.38
RORAP35398 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.43■□□□□ 0.38
RORAP35398 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.43■□□□□ 0.38
RORAP35398 MIR3652-201ENST00000579335 131 ntBASIC17.43■□□□□ 0.38
RORAP35398 AC005332.3-201ENST00000589904 676 ntBASIC17.43■□□□□ 0.38
RORAP35398 AL121894.2-201ENST00000602977 491 ntBASIC17.43■□□□□ 0.38
RORAP35398 AL390719.2-201ENST00000606993 987 ntBASIC17.43■□□□□ 0.38
RORAP35398 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms