Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.66■□□□□ 0.26
GDF1P27539 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.66■□□□□ 0.26
GDF1P27539 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.66■□□□□ 0.26
GDF1P27539 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
GDF1P27539 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GDF1P27539 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GDF1P27539 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GDF1P27539 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.66■□□□□ 0.26
GDF1P27539 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.66■□□□□ 0.26
GDF1P27539 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.66■□□□□ 0.26
GDF1P27539 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.66■□□□□ 0.26
GDF1P27539 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.66■□□□□ 0.26
GDF1P27539 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.66■□□□□ 0.26
GDF1P27539 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.66■□□□□ 0.26
GDF1P27539 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GDF1P27539 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
GDF1P27539 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GDF1P27539 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.66■□□□□ 0.26
GDF1P27539 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GDF1P27539 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
GDF1P27539 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
GDF1P27539 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GDF1P27539 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GDF1P27539 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
GDF1P27539 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
GDF1P27539 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.66■□□□□ 0.26
GDF1P27539 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.65■□□□□ 0.26
GDF1P27539 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GDF1P27539 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
GDF1P27539 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GDF1P27539 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GDF1P27539 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.65■□□□□ 0.26
GDF1P27539 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
GDF1P27539 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GDF1P27539 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.65■□□□□ 0.26
GDF1P27539 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GDF1P27539 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GDF1P27539 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GDF1P27539 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
GDF1P27539 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GDF1P27539 TSPY22P-201ENST00000427496 604 ntBASIC16.65■□□□□ 0.26
GDF1P27539 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.65■□□□□ 0.26
GDF1P27539 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.65■□□□□ 0.26
GDF1P27539 KRT8P26-201ENST00000534154 1276 ntBASIC16.65■□□□□ 0.26
GDF1P27539 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.65■□□□□ 0.26
GDF1P27539 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.65■□□□□ 0.26
GDF1P27539 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.65■□□□□ 0.26
GDF1P27539 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.65■□□□□ 0.26
GDF1P27539 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
GDF1P27539 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
GDF1P27539 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
GDF1P27539 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GDF1P27539 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
GDF1P27539 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
GDF1P27539 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.64■□□□□ 0.25
GDF1P27539 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.64■□□□□ 0.25
GDF1P27539 Z83836.1-201ENST00000624605 1642 ntBASIC16.64■□□□□ 0.25
GDF1P27539 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
GDF1P27539 TSSC2-201ENST00000450217 709 ntBASIC16.64■□□□□ 0.25
GDF1P27539 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.64■□□□□ 0.25
GDF1P27539 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.64■□□□□ 0.25
GDF1P27539 RNF126P1-202ENST00000569893 925 ntBASIC16.64■□□□□ 0.25
GDF1P27539 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
GDF1P27539 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.64■□□□□ 0.25
GDF1P27539 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GDF1P27539 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GDF1P27539 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GDF1P27539 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GDF1P27539 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
GDF1P27539 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
GDF1P27539 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GDF1P27539 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GDF1P27539 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GDF1P27539 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GDF1P27539 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.64■□□□□ 0.25
GDF1P27539 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.64■□□□□ 0.25
GDF1P27539 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GDF1P27539 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.64■□□□□ 0.25
GDF1P27539 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GDF1P27539 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GDF1P27539 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
GDF1P27539 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GDF1P27539 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
GDF1P27539 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GDF1P27539 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
GDF1P27539 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GDF1P27539 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GDF1P27539 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GDF1P27539 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GDF1P27539 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.63■□□□□ 0.25
GDF1P27539 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GDF1P27539 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.63■□□□□ 0.25
GDF1P27539 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GDF1P27539 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.63■□□□□ 0.25
GDF1P27539 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
GDF1P27539 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
GDF1P27539 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.63■□□□□ 0.25
GDF1P27539 KRT18P56-201ENST00000507275 550 ntBASIC16.63■□□□□ 0.25
GDF1P27539 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
GDF1P27539 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms