Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AL137013.1-201ENST00000432946 1228 ntBASIC18.56■□□□□ 0.56
HLA-DPA1P20036 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.56■□□□□ 0.56
HLA-DPA1P20036 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.56■□□□□ 0.56
HLA-DPA1P20036 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.56■□□□□ 0.56
HLA-DPA1P20036 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.56■□□□□ 0.56
HLA-DPA1P20036 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.56■□□□□ 0.56
HLA-DPA1P20036 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DPA1P20036 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
HLA-DPA1P20036 AC092865.7-201ENST00000641832 219 ntBASIC18.56■□□□□ 0.56
HLA-DPA1P20036 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DPA1P20036 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.56■□□□□ 0.56
HLA-DPA1P20036 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.56■□□□□ 0.56
HLA-DPA1P20036 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.56■□□□□ 0.56
HLA-DPA1P20036 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DPA1P20036 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
HLA-DPA1P20036 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DPA1P20036 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DPA1P20036 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DPA1P20036 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DPA1P20036 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.55■□□□□ 0.56
HLA-DPA1P20036 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DPA1P20036 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DPA1P20036 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.55■□□□□ 0.56
HLA-DPA1P20036 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DPA1P20036 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DPA1P20036 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.55■□□□□ 0.56
HLA-DPA1P20036 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.55■□□□□ 0.56
HLA-DPA1P20036 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
HLA-DPA1P20036 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DPA1P20036 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.55■□□□□ 0.56
HLA-DPA1P20036 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DPA1P20036 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
HLA-DPA1P20036 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.55■□□□□ 0.56
HLA-DPA1P20036 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.55■□□□□ 0.56
HLA-DPA1P20036 TERF1P1-201ENST00000311003 1181 ntBASIC18.55■□□□□ 0.56
HLA-DPA1P20036 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DPA1P20036 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DPA1P20036 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.55■□□□□ 0.56
HLA-DPA1P20036 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
HLA-DPA1P20036 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
HLA-DPA1P20036 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.55■□□□□ 0.56
HLA-DPA1P20036 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.55■□□□□ 0.56
HLA-DPA1P20036 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.55■□□□□ 0.56
HLA-DPA1P20036 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DPA1P20036 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DPA1P20036 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.55■□□□□ 0.56
HLA-DPA1P20036 AC135050.7-201ENST00000624508 2218 ntBASIC18.55■□□□□ 0.56
HLA-DPA1P20036 SDHAP2-201ENST00000455183 2001 ntBASIC18.55■□□□□ 0.56
HLA-DPA1P20036 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DPA1P20036 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.55■□□□□ 0.56
HLA-DPA1P20036 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
HLA-DPA1P20036 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DPA1P20036 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DPA1P20036 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HLA-DPA1P20036 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
HLA-DPA1P20036 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.54■□□□□ 0.56
HLA-DPA1P20036 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.54■□□□□ 0.56
HLA-DPA1P20036 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DPA1P20036 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.54■□□□□ 0.56
HLA-DPA1P20036 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DPA1P20036 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.54■□□□□ 0.56
HLA-DPA1P20036 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DPA1P20036 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DPA1P20036 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.54■□□□□ 0.56
HLA-DPA1P20036 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.54■□□□□ 0.56
HLA-DPA1P20036 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HLA-DPA1P20036 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.54■□□□□ 0.56
HLA-DPA1P20036 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DPA1P20036 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.54■□□□□ 0.56
HLA-DPA1P20036 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DPA1P20036 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HLA-DPA1P20036 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
HLA-DPA1P20036 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.54■□□□□ 0.56
HLA-DPA1P20036 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.54■□□□□ 0.56
HLA-DPA1P20036 AL031432.5-201ENST00000641059 760 ntBASIC18.54■□□□□ 0.56
HLA-DPA1P20036 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.54■□□□□ 0.56
HLA-DPA1P20036 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DPA1P20036 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
HLA-DPA1P20036 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DPA1P20036 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DPA1P20036 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HLA-DPA1P20036 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DPA1P20036 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DPA1P20036 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DPA1P20036 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DPA1P20036 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DPA1P20036 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.53■□□□□ 0.56
HLA-DPA1P20036 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DPA1P20036 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
HLA-DPA1P20036 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
HLA-DPA1P20036 GMCL1P1-201ENST00000463439 1581 ntBASIC18.53■□□□□ 0.56
HLA-DPA1P20036 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.53■□□□□ 0.56
HLA-DPA1P20036 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
HLA-DPA1P20036 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
HLA-DPA1P20036 MIR3917-201ENST00000580971 93 ntBASIC18.53■□□□□ 0.56
HLA-DPA1P20036 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
HLA-DPA1P20036 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DPA1P20036 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.53■□□□□ 0.56
HLA-DPA1P20036 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HLA-DPA1P20036 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms