Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 KRT8P32-201ENST00000512863 1461 ntBASIC16.16■□□□□ 0.18
ATF1P18846 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATF1P18846 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATF1P18846 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.16■□□□□ 0.18
ATF1P18846 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ATF1P18846 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.16■□□□□ 0.18
ATF1P18846 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATF1P18846 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.16■□□□□ 0.18
ATF1P18846 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
ATF1P18846 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.16■□□□□ 0.18
ATF1P18846 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATF1P18846 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATF1P18846 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.16■□□□□ 0.18
ATF1P18846 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.16■□□□□ 0.18
ATF1P18846 RPS2P4-201ENST00000476944 856 ntBASIC16.16■□□□□ 0.18
ATF1P18846 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.16■□□□□ 0.18
ATF1P18846 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.16■□□□□ 0.18
ATF1P18846 AL353708.3-201ENST00000610272 989 ntBASIC16.16■□□□□ 0.18
ATF1P18846 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.16■□□□□ 0.18
ATF1P18846 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATF1P18846 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.16■□□□□ 0.18
ATF1P18846 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATF1P18846 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATF1P18846 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.16■□□□□ 0.18
ATF1P18846 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATF1P18846 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
ATF1P18846 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATF1P18846 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.16■□□□□ 0.18
ATF1P18846 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ATF1P18846 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ATF1P18846 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.15■□□□□ 0.18
ATF1P18846 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.15■□□□□ 0.18
ATF1P18846 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATF1P18846 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATF1P18846 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
ATF1P18846 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
ATF1P18846 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ATF1P18846 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.15■□□□□ 0.18
ATF1P18846 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.15■□□□□ 0.18
ATF1P18846 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ATF1P18846 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.15■□□□□ 0.18
ATF1P18846 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.15■□□□□ 0.18
ATF1P18846 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATF1P18846 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATF1P18846 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.15■□□□□ 0.18
ATF1P18846 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATF1P18846 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATF1P18846 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATF1P18846 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ATF1P18846 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ATF1P18846 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ATF1P18846 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.15■□□□□ 0.18
ATF1P18846 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
ATF1P18846 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.15■□□□□ 0.18
ATF1P18846 KSR1P1-201ENST00000446298 240 ntBASIC16.15■□□□□ 0.18
ATF1P18846 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.15■□□□□ 0.18
ATF1P18846 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ATF1P18846 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
ATF1P18846 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.15■□□□□ 0.18
ATF1P18846 AC091390.4-202ENST00000476426 537 ntBASIC16.15■□□□□ 0.18
ATF1P18846 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ATF1P18846 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.15■□□□□ 0.18
ATF1P18846 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ATF1P18846 AC108860.2-201ENST00000562760 2183 ntBASIC16.15■□□□□ 0.18
ATF1P18846 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
ATF1P18846 AC006058.3-201ENST00000606217 1069 ntBASIC16.15■□□□□ 0.18
ATF1P18846 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATF1P18846 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
ATF1P18846 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.15■□□□□ 0.18
ATF1P18846 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.15■□□□□ 0.18
ATF1P18846 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ATF1P18846 AL357033.4-201ENST00000617703 1807 ntBASIC16.15■□□□□ 0.18
ATF1P18846 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATF1P18846 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATF1P18846 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ATF1P18846 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATF1P18846 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATF1P18846 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
ATF1P18846 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.14■□□□□ 0.17
ATF1P18846 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATF1P18846 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATF1P18846 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATF1P18846 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATF1P18846 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATF1P18846 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATF1P18846 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATF1P18846 AC004951.3-201ENST00000418645 1148 ntBASIC16.14■□□□□ 0.17
ATF1P18846 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.14■□□□□ 0.17
ATF1P18846 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
ATF1P18846 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATF1P18846 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
ATF1P18846 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
ATF1P18846 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATF1P18846 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.14■□□□□ 0.17
ATF1P18846 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
ATF1P18846 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATF1P18846 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATF1P18846 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ATF1P18846 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ATF1P18846 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms