Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTLA4P16410 KRT8P9-201ENST00000558927 1449 ntBASIC16.33■□□□□ 0.2
CTLA4P16410 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.33■□□□□ 0.2
CTLA4P16410 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTLA4P16410 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTLA4P16410 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.33■□□□□ 0.2
CTLA4P16410 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CTLA4P16410 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTLA4P16410 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CTLA4P16410 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.33■□□□□ 0.2
CTLA4P16410 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTLA4P16410 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTLA4P16410 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTLA4P16410 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTLA4P16410 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTLA4P16410 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTLA4P16410 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CTLA4P16410 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CTLA4P16410 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTLA4P16410 INGX-201ENST00000359239 846 ntBASIC16.32■□□□□ 0.2
CTLA4P16410 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.32■□□□□ 0.2
CTLA4P16410 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CTLA4P16410 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CTLA4P16410 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTLA4P16410 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.32■□□□□ 0.2
CTLA4P16410 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.32■□□□□ 0.2
CTLA4P16410 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.32■□□□□ 0.2
CTLA4P16410 CYP2D8P-201ENST00000433633 1490 ntBASIC16.32■□□□□ 0.2
CTLA4P16410 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.32■□□□□ 0.2
CTLA4P16410 KRT8P7-201ENST00000533003 1432 ntBASIC16.32■□□□□ 0.2
CTLA4P16410 AC008764.6-201ENST00000595909 2069 ntBASIC16.32■□□□□ 0.2
CTLA4P16410 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CTLA4P16410 AC009102.3-201ENST00000623118 1491 ntBASIC16.32■□□□□ 0.2
CTLA4P16410 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.32■□□□□ 0.2
CTLA4P16410 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CTLA4P16410 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTLA4P16410 AC067852.2-201ENST00000590513 2313 ntBASIC16.31■□□□□ 0.2
CTLA4P16410 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.31■□□□□ 0.2
CTLA4P16410 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTLA4P16410 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTLA4P16410 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.31■□□□□ 0.2
CTLA4P16410 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTLA4P16410 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.31■□□□□ 0.2
CTLA4P16410 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTLA4P16410 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CTLA4P16410 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTLA4P16410 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTLA4P16410 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTLA4P16410 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CTLA4P16410 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTLA4P16410 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTLA4P16410 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTLA4P16410 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTLA4P16410 MIR149-201ENST00000384879 89 ntBASIC16.31■□□□□ 0.2
CTLA4P16410 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.31■□□□□ 0.2
CTLA4P16410 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.31■□□□□ 0.2
CTLA4P16410 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTLA4P16410 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.31■□□□□ 0.2
CTLA4P16410 EGLN1P1-201ENST00000531623 762 ntBASIC16.31■□□□□ 0.2
CTLA4P16410 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTLA4P16410 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.31■□□□□ 0.2
CTLA4P16410 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTLA4P16410 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTLA4P16410 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTLA4P16410 AC010653.2-201ENST00000623505 997 ntBASIC16.31■□□□□ 0.2
CTLA4P16410 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTLA4P16410 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTLA4P16410 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
CTLA4P16410 AL096828.2-201ENST00000567259 1965 ntBASIC16.31■□□□□ 0.2
CTLA4P16410 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTLA4P16410 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTLA4P16410 AC138028.4-201ENST00000564984 1845 ntBASIC16.31■□□□□ 0.2
CTLA4P16410 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTLA4P16410 PHGDH-209ENST00000641074 1780 ntBASIC16.31■□□□□ 0.2
CTLA4P16410 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTLA4P16410 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTLA4P16410 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.3■□□□□ 0.2
CTLA4P16410 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CTLA4P16410 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.3■□□□□ 0.2
CTLA4P16410 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTLA4P16410 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTLA4P16410 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.3■□□□□ 0.2
CTLA4P16410 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CTLA4P16410 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTLA4P16410 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.3■□□□□ 0.2
CTLA4P16410 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CTLA4P16410 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTLA4P16410 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CTLA4P16410 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CTLA4P16410 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTLA4P16410 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
CTLA4P16410 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.3■□□□□ 0.2
CTLA4P16410 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.3■□□□□ 0.2
CTLA4P16410 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.3■□□□□ 0.2
CTLA4P16410 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.3■□□□□ 0.2
CTLA4P16410 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.3■□□□□ 0.2
CTLA4P16410 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTLA4P16410 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CTLA4P16410 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTLA4P16410 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms