Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
CFTRP13569 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC31.36■■■□□ 2.61
CFTRP13569 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CFTRP13569 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC31.36■■■□□ 2.61
CFTRP13569 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC31.36■■■□□ 2.61
CFTRP13569 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CFTRP13569 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CFTRP13569 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CFTRP13569 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CFTRP13569 LINC01006-201ENST00000333319 2292 ntBASIC31.36■■■□□ 2.61
CFTRP13569 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC31.35■■■□□ 2.61
CFTRP13569 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CFTRP13569 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CFTRP13569 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
CFTRP13569 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
CFTRP13569 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC31.35■■■□□ 2.61
CFTRP13569 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC31.35■■■□□ 2.61
CFTRP13569 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC31.35■■■□□ 2.61
CFTRP13569 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
CFTRP13569 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CFTRP13569 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CFTRP13569 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC31.34■■■□□ 2.61
CFTRP13569 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC31.34■■■□□ 2.61
CFTRP13569 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC31.34■■■□□ 2.61
CFTRP13569 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CFTRP13569 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC31.34■■■□□ 2.61
CFTRP13569 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
CFTRP13569 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
CFTRP13569 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CFTRP13569 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC31.34■■■□□ 2.61
CFTRP13569 KRT18P2-201ENST00000447938 1258 ntBASIC31.33■■■□□ 2.61
CFTRP13569 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC31.33■■■□□ 2.61
CFTRP13569 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CFTRP13569 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
CFTRP13569 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC31.33■■■□□ 2.61
CFTRP13569 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC31.33■■■□□ 2.61
CFTRP13569 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CFTRP13569 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC31.33■■■□□ 2.61
CFTRP13569 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CFTRP13569 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC31.33■■■□□ 2.61
CFTRP13569 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CFTRP13569 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC31.33■■■□□ 2.61
CFTRP13569 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CFTRP13569 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CFTRP13569 AC254562.1-201ENST00000417586 456 ntBASIC31.33■■■□□ 2.61
CFTRP13569 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC31.33■■■□□ 2.61
CFTRP13569 AC108751.1-201ENST00000490852 363 ntBASIC31.33■■■□□ 2.61
CFTRP13569 CFL1-212ENST00000531413 636 ntTSL 3 BASIC31.33■■■□□ 2.61
CFTRP13569 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC31.33■■■□□ 2.61
CFTRP13569 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC31.33■■■□□ 2.61
CFTRP13569 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC31.33■■■□□ 2.61
CFTRP13569 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC31.33■■■□□ 2.61
CFTRP13569 AC002310.6-201ENST00000624451 1377 ntBASIC31.32■■■□□ 2.61
CFTRP13569 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC31.32■■■□□ 2.6
CFTRP13569 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.6
CFTRP13569 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC31.32■■■□□ 2.6
CFTRP13569 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CFTRP13569 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CFTRP13569 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
CFTRP13569 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CFTRP13569 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC31.32■■■□□ 2.6
CFTRP13569 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CFTRP13569 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC31.32■■■□□ 2.6
CFTRP13569 MSRA-206ENST00000521209 814 ntTSL 3 BASIC31.32■■■□□ 2.6
CFTRP13569 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CFTRP13569 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
CFTRP13569 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CFTRP13569 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC31.31■■■□□ 2.6
CFTRP13569 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC31.31■■■□□ 2.6
CFTRP13569 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC31.31■■■□□ 2.6
CFTRP13569 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC31.31■■■□□ 2.6
CFTRP13569 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC31.31■■■□□ 2.6
CFTRP13569 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC31.31■■■□□ 2.6
CFTRP13569 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC31.31■■■□□ 2.6
CFTRP13569 SDCCAG3P1-201ENST00000589292 1150 ntBASIC31.31■■■□□ 2.6
CFTRP13569 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CFTRP13569 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
CFTRP13569 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CFTRP13569 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CFTRP13569 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CFTRP13569 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CFTRP13569 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
CFTRP13569 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC31.3■■■□□ 2.6
CFTRP13569 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC31.3■■■□□ 2.6
CFTRP13569 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC31.29■■■□□ 2.6
CFTRP13569 PMPCAP1-201ENST00000508114 1576 ntBASIC31.29■■■□□ 2.6
CFTRP13569 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
CFTRP13569 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CFTRP13569 SRP19-202ENST00000445150 833 ntTSL 2 BASIC31.29■■■□□ 2.6
CFTRP13569 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC31.29■■■□□ 2.6
CFTRP13569 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CFTRP13569 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC31.29■■■□□ 2.6
CFTRP13569 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC31.29■■■□□ 2.6
CFTRP13569 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC31.29■■■□□ 2.6
CFTRP13569 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
CFTRP13569 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CFTRP13569 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
CFTRP13569 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CFTRP13569 SIGLEC16-201ENST00000599858 1437 ntBASIC31.28■■■□□ 2.6
CFTRP13569 LINC00602-201ENST00000629776 2065 ntBASIC31.28■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms