Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.55■□□□□ 0.56
SRFP11831 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRFP11831 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.55■□□□□ 0.56
SRFP11831 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.55■□□□□ 0.56
SRFP11831 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.55■□□□□ 0.56
SRFP11831 UNC93B6-202ENST00000528242 690 ntBASIC18.55■□□□□ 0.56
SRFP11831 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.55■□□□□ 0.56
SRFP11831 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.55■□□□□ 0.56
SRFP11831 AC002347.1-201ENST00000569543 541 ntBASIC18.55■□□□□ 0.56
SRFP11831 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SRFP11831 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.55■□□□□ 0.56
SRFP11831 AC107918.4-202ENST00000641623 219 ntBASIC18.55■□□□□ 0.56
SRFP11831 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SRFP11831 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRFP11831 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRFP11831 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SRFP11831 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRFP11831 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SRFP11831 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SRFP11831 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRFP11831 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRFP11831 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRFP11831 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.54■□□□□ 0.56
SRFP11831 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRFP11831 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SRFP11831 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRFP11831 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SRFP11831 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SRFP11831 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.54■□□□□ 0.56
SRFP11831 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.54■□□□□ 0.56
SRFP11831 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.54■□□□□ 0.56
SRFP11831 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.54■□□□□ 0.56
SRFP11831 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.54■□□□□ 0.56
SRFP11831 MTDHP4-201ENST00000600287 670 ntBASIC18.54■□□□□ 0.56
SRFP11831 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.54■□□□□ 0.56
SRFP11831 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRFP11831 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRFP11831 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SRFP11831 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SRFP11831 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.53■□□□□ 0.56
SRFP11831 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRFP11831 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRFP11831 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRFP11831 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRFP11831 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.53■□□□□ 0.56
SRFP11831 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRFP11831 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SRFP11831 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.53■□□□□ 0.56
SRFP11831 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.53■□□□□ 0.56
SRFP11831 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.53■□□□□ 0.56
SRFP11831 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.53■□□□□ 0.56
SRFP11831 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SRFP11831 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SRFP11831 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.53■□□□□ 0.56
SRFP11831 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SRFP11831 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SRFP11831 AL024508.2-201ENST00000607749 1894 ntBASIC18.53■□□□□ 0.56
SRFP11831 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRFP11831 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.53■□□□□ 0.56
SRFP11831 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.53■□□□□ 0.56
SRFP11831 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRFP11831 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SRFP11831 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SRFP11831 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.53■□□□□ 0.56
SRFP11831 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SRFP11831 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SRFP11831 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SRFP11831 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SRFP11831 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SRFP11831 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SRFP11831 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SRFP11831 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SRFP11831 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.52■□□□□ 0.56
SRFP11831 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
SRFP11831 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.52■□□□□ 0.56
SRFP11831 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.52■□□□□ 0.56
SRFP11831 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.52■□□□□ 0.56
SRFP11831 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.52■□□□□ 0.56
SRFP11831 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.52■□□□□ 0.56
SRFP11831 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SRFP11831 NKAPP1-205ENST00000585790 367 ntBASIC18.52■□□□□ 0.56
SRFP11831 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.52■□□□□ 0.56
SRFP11831 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SRFP11831 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.52■□□□□ 0.56
SRFP11831 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.52■□□□□ 0.56
SRFP11831 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SRFP11831 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SRFP11831 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SRFP11831 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SRFP11831 AC125437.2-201ENST00000625180 2167 ntBASIC18.52■□□□□ 0.56
SRFP11831 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SRFP11831 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SRFP11831 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
SRFP11831 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SRFP11831 AP002414.3-201ENST00000589352 1468 ntBASIC18.52■□□□□ 0.55
SRFP11831 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
SRFP11831 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRFP11831 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SRFP11831 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
SRFP11831 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms