Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB40ALP0C0E4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB40ALP0C0E4 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB40ALP0C0E4 IGHGP-201ENST00000390555 1178 ntBASIC17.32■□□□□ 0.36
RAB40ALP0C0E4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB40ALP0C0E4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB40ALP0C0E4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB40ALP0C0E4 AC012615.1-201ENST00000565797 1299 ntBASIC17.32■□□□□ 0.36
RAB40ALP0C0E4 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RAB40ALP0C0E4 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.32■□□□□ 0.36
RAB40ALP0C0E4 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB40ALP0C0E4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB40ALP0C0E4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB40ALP0C0E4 AL357033.4-201ENST00000617703 1807 ntBASIC17.32■□□□□ 0.36
RAB40ALP0C0E4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.32■□□□□ 0.36
RAB40ALP0C0E4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB40ALP0C0E4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB40ALP0C0E4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB40ALP0C0E4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB40ALP0C0E4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB40ALP0C0E4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB40ALP0C0E4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.32■□□□□ 0.36
RAB40ALP0C0E4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB40ALP0C0E4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB40ALP0C0E4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40ALP0C0E4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40ALP0C0E4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40ALP0C0E4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40ALP0C0E4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40ALP0C0E4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RAB40ALP0C0E4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40ALP0C0E4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RAB40ALP0C0E4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40ALP0C0E4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40ALP0C0E4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.31■□□□□ 0.36
RAB40ALP0C0E4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40ALP0C0E4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RAB40ALP0C0E4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40ALP0C0E4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40ALP0C0E4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.31■□□□□ 0.36
RAB40ALP0C0E4 LINC00265-3P-201ENST00000447588 903 ntBASIC17.31■□□□□ 0.36
RAB40ALP0C0E4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.31■□□□□ 0.36
RAB40ALP0C0E4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40ALP0C0E4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.31■□□□□ 0.36
RAB40ALP0C0E4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.31■□□□□ 0.36
RAB40ALP0C0E4 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.31■□□□□ 0.36
RAB40ALP0C0E4 IGHV3-41-201ENST00000613121 348 ntBASIC17.31■□□□□ 0.36
RAB40ALP0C0E4 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40ALP0C0E4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40ALP0C0E4 AC093503.3-201ENST00000624917 2352 ntBASIC17.31■□□□□ 0.36
RAB40ALP0C0E4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40ALP0C0E4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40ALP0C0E4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40ALP0C0E4 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RAB40ALP0C0E4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB40ALP0C0E4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB40ALP0C0E4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.3■□□□□ 0.36
RAB40ALP0C0E4 KRT8P50-201ENST00000562022 1438 ntBASIC17.3■□□□□ 0.36
RAB40ALP0C0E4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.3■□□□□ 0.36
RAB40ALP0C0E4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB40ALP0C0E4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB40ALP0C0E4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.3■□□□□ 0.36
RAB40ALP0C0E4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB40ALP0C0E4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RAB40ALP0C0E4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RAB40ALP0C0E4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB40ALP0C0E4 AC004870.1-201ENST00000315132 882 ntBASIC17.3■□□□□ 0.36
RAB40ALP0C0E4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB40ALP0C0E4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB40ALP0C0E4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB40ALP0C0E4 AP000867.3-201ENST00000524675 377 ntBASIC17.3■□□□□ 0.36
RAB40ALP0C0E4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.3■□□□□ 0.36
RAB40ALP0C0E4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.3■□□□□ 0.36
RAB40ALP0C0E4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.3■□□□□ 0.36
RAB40ALP0C0E4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RAB40ALP0C0E4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB40ALP0C0E4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
RAB40ALP0C0E4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RAB40ALP0C0E4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB40ALP0C0E4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RAB40ALP0C0E4 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB40ALP0C0E4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.3■□□□□ 0.36
RAB40ALP0C0E4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB40ALP0C0E4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 FAAHP1-202ENST00000446499 1238 ntBASIC17.29■□□□□ 0.36
RAB40ALP0C0E4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms