Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LCATP04180 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LCATP04180 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
LCATP04180 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LCATP04180 MMP23A-201ENST00000234610 1017 ntBASIC16.1■□□□□ 0.17
LCATP04180 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.1■□□□□ 0.17
LCATP04180 AP000593.1-201ENST00000393668 712 ntBASIC16.1■□□□□ 0.17
LCATP04180 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
LCATP04180 AL596275.1-201ENST00000423464 877 ntBASIC16.1■□□□□ 0.17
LCATP04180 AC007663.1-201ENST00000438948 1240 ntBASIC16.1■□□□□ 0.17
LCATP04180 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LCATP04180 AC128688.1-201ENST00000487626 519 ntBASIC16.1■□□□□ 0.17
LCATP04180 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.1■□□□□ 0.17
LCATP04180 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LCATP04180 NAPSB-206ENST00000562112 1266 ntBASIC16.1■□□□□ 0.17
LCATP04180 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.1■□□□□ 0.17
LCATP04180 AC066615.1-201ENST00000640911 628 ntBASIC16.1■□□□□ 0.17
LCATP04180 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LCATP04180 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LCATP04180 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
LCATP04180 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LCATP04180 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LCATP04180 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LCATP04180 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
LCATP04180 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LCATP04180 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LCATP04180 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LCATP04180 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LCATP04180 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LCATP04180 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LCATP04180 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
LCATP04180 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCATP04180 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.09■□□□□ 0.17
LCATP04180 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LCATP04180 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.09■□□□□ 0.17
LCATP04180 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
LCATP04180 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
LCATP04180 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
LCATP04180 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCATP04180 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LCATP04180 TSPY14P-201ENST00000303979 915 ntBASIC16.09■□□□□ 0.17
LCATP04180 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LCATP04180 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LCATP04180 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.09■□□□□ 0.17
LCATP04180 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LCATP04180 EGLN1P1-201ENST00000531623 762 ntBASIC16.09■□□□□ 0.17
LCATP04180 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.09■□□□□ 0.17
LCATP04180 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
LCATP04180 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCATP04180 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.09■□□□□ 0.17
LCATP04180 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.09■□□□□ 0.17
LCATP04180 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCATP04180 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCATP04180 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LCATP04180 AC007613.1-201ENST00000572811 2597 ntBASIC16.09■□□□□ 0.17
LCATP04180 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCATP04180 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCATP04180 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LCATP04180 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LCATP04180 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.08■□□□□ 0.17
LCATP04180 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LCATP04180 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LCATP04180 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.08■□□□□ 0.17
LCATP04180 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LCATP04180 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
LCATP04180 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LCATP04180 BICD1-207ENST00000551848 1962 ntBASIC16.08■□□□□ 0.16
LCATP04180 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LCATP04180 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.08■□□□□ 0.16
LCATP04180 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.08■□□□□ 0.16
LCATP04180 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LCATP04180 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.08■□□□□ 0.16
LCATP04180 CR769767.2-201ENST00000622735 460 ntBASIC16.08■□□□□ 0.16
LCATP04180 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LCATP04180 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LCATP04180 KRT8P9-201ENST00000558927 1449 ntBASIC16.08■□□□□ 0.16
LCATP04180 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
LCATP04180 CYP2D8P-201ENST00000433633 1490 ntBASIC16.08■□□□□ 0.16
LCATP04180 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.08■□□□□ 0.16
LCATP04180 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LCATP04180 AL390961.4-201ENST00000623958 2535 ntBASIC16.08■□□□□ 0.16
LCATP04180 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
LCATP04180 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LCATP04180 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LCATP04180 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCATP04180 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LCATP04180 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCATP04180 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
LCATP04180 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCATP04180 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LCATP04180 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
LCATP04180 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LCATP04180 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.07■□□□□ 0.16
LCATP04180 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LCATP04180 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LCATP04180 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LCATP04180 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.07■□□□□ 0.16
LCATP04180 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.07■□□□□ 0.16
LCATP04180 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.07■□□□□ 0.16
LCATP04180 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms