Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
APOBP04114 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
APOBP04114 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC11.42□□□□□ -0.58
APOBP04114 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC11.42□□□□□ -0.58
APOBP04114 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC11.42□□□□□ -0.58
APOBP04114 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
APOBP04114 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
APOBP04114 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC11.42□□□□□ -0.58
APOBP04114 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC11.42□□□□□ -0.58
APOBP04114 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC11.42□□□□□ -0.58
APOBP04114 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
APOBP04114 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
APOBP04114 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
APOBP04114 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC11.42□□□□□ -0.58
APOBP04114 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
APOBP04114 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC11.42□□□□□ -0.58
APOBP04114 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC11.42□□□□□ -0.58
APOBP04114 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
APOBP04114 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
APOBP04114 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
APOBP04114 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
APOBP04114 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
APOBP04114 MIR770-201ENST00000390219 98 ntBASIC11.42□□□□□ -0.58
APOBP04114 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC11.42□□□□□ -0.58
APOBP04114 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
APOBP04114 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
APOBP04114 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC11.42□□□□□ -0.58
APOBP04114 ANKRD20A8P-203ENST00000641373 517 ntBASIC11.42□□□□□ -0.58
APOBP04114 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
APOBP04114 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC11.42□□□□□ -0.58
APOBP04114 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
APOBP04114 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
APOBP04114 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
APOBP04114 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
APOBP04114 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
APOBP04114 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC11.42□□□□□ -0.58
APOBP04114 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC11.42□□□□□ -0.58
APOBP04114 PNMT-202ENST00000394246 821 ntTSL 2 BASIC11.42□□□□□ -0.58
APOBP04114 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
APOBP04114 ABCD1P5-201ENST00000445663 754 ntBASIC11.42□□□□□ -0.58
APOBP04114 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC11.42□□□□□ -0.58
APOBP04114 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
APOBP04114 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC11.42□□□□□ -0.58
APOBP04114 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC11.42□□□□□ -0.58
APOBP04114 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
APOBP04114 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
APOBP04114 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
APOBP04114 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
APOBP04114 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
APOBP04114 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
APOBP04114 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
APOBP04114 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
APOBP04114 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC11.41□□□□□ -0.58
APOBP04114 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
APOBP04114 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC11.41□□□□□ -0.58
APOBP04114 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
APOBP04114 AP002414.3-201ENST00000589352 1468 ntBASIC11.41□□□□□ -0.58
APOBP04114 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
APOBP04114 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
APOBP04114 AL645939.2-201ENST00000427340 991 ntBASIC11.41□□□□□ -0.58
APOBP04114 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC11.41□□□□□ -0.58
APOBP04114 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
APOBP04114 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
APOBP04114 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC11.41□□□□□ -0.58
APOBP04114 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
APOBP04114 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC11.41□□□□□ -0.58
APOBP04114 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
APOBP04114 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
APOBP04114 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
APOBP04114 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
APOBP04114 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
APOBP04114 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
APOBP04114 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
APOBP04114 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
APOBP04114 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
APOBP04114 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC11.4□□□□□ -0.58
APOBP04114 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC11.4□□□□□ -0.58
APOBP04114 AP000867.4-201ENST00000641616 219 ntBASIC11.4□□□□□ -0.58
APOBP04114 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC11.4□□□□□ -0.58
APOBP04114 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
APOBP04114 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
APOBP04114 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
APOBP04114 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
APOBP04114 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
APOBP04114 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC11.4□□□□□ -0.58
APOBP04114 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
APOBP04114 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC11.4□□□□□ -0.58
APOBP04114 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
APOBP04114 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
APOBP04114 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
APOBP04114 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
APOBP04114 SLBP-205ENST00000488267 987 ntTSL 2 BASIC11.4□□□□□ -0.58
APOBP04114 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC11.4□□□□□ -0.58
APOBP04114 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC11.4□□□□□ -0.58
APOBP04114 AL096865.1-201ENST00000606796 927 ntBASIC11.4□□□□□ -0.58
APOBP04114 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
APOBP04114 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
APOBP04114 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
APOBP04114 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
APOBP04114 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms