Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND1P03886 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND1P03886 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.37■□□□□ 0.37
MT-ND1P03886 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.37■□□□□ 0.37
MT-ND1P03886 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
MT-ND1P03886 AC026366.1-201ENST00000488803 879 ntBASIC17.37■□□□□ 0.37
MT-ND1P03886 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND1P03886 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.37■□□□□ 0.37
MT-ND1P03886 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.37■□□□□ 0.37
MT-ND1P03886 MTDHP1-201ENST00000605323 784 ntBASIC17.37■□□□□ 0.37
MT-ND1P03886 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.37■□□□□ 0.37
MT-ND1P03886 AC069544.1-201ENST00000609399 999 ntBASIC17.37■□□□□ 0.37
MT-ND1P03886 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND1P03886 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
MT-ND1P03886 PP12613-201ENST00000424958 2230 ntBASIC17.37■□□□□ 0.37
MT-ND1P03886 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND1P03886 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND1P03886 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.37■□□□□ 0.37
MT-ND1P03886 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.37■□□□□ 0.37
MT-ND1P03886 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND1P03886 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND1P03886 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND1P03886 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MT-ND1P03886 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
MT-ND1P03886 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.37■□□□□ 0.37
MT-ND1P03886 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.37■□□□□ 0.37
MT-ND1P03886 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.36■□□□□ 0.37
MT-ND1P03886 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND1P03886 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND1P03886 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND1P03886 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
MT-ND1P03886 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND1P03886 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND1P03886 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND1P03886 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND1P03886 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND1P03886 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND1P03886 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND1P03886 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
MT-ND1P03886 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND1P03886 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
MT-ND1P03886 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
MT-ND1P03886 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.36■□□□□ 0.37
MT-ND1P03886 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.36■□□□□ 0.37
MT-ND1P03886 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.36■□□□□ 0.37
MT-ND1P03886 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
MT-ND1P03886 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
MT-ND1P03886 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.36■□□□□ 0.37
MT-ND1P03886 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND1P03886 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND1P03886 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND1P03886 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND1P03886 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
MT-ND1P03886 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND1P03886 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
MT-ND1P03886 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND1P03886 KRT8P32-201ENST00000512863 1461 ntBASIC17.36■□□□□ 0.37
MT-ND1P03886 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND1P03886 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
MT-ND1P03886 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND1P03886 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND1P03886 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND1P03886 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND1P03886 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MT-ND1P03886 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
MT-ND1P03886 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
MT-ND1P03886 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
MT-ND1P03886 AC008556.1-201ENST00000610908 2040 ntBASIC17.35■□□□□ 0.37
MT-ND1P03886 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
MT-ND1P03886 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MT-ND1P03886 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.35■□□□□ 0.37
MT-ND1P03886 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MT-ND1P03886 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MT-ND1P03886 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MT-ND1P03886 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.35■□□□□ 0.37
MT-ND1P03886 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.35■□□□□ 0.37
MT-ND1P03886 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MT-ND1P03886 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MT-ND1P03886 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MT-ND1P03886 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.35■□□□□ 0.37
MT-ND1P03886 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MT-ND1P03886 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.35■□□□□ 0.37
MT-ND1P03886 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MT-ND1P03886 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
MT-ND1P03886 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
MT-ND1P03886 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
MT-ND1P03886 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
MT-ND1P03886 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MT-ND1P03886 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MT-ND1P03886 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
MT-ND1P03886 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MT-ND1P03886 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
MT-ND1P03886 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MT-ND1P03886 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.34■□□□□ 0.37
MT-ND1P03886 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.34■□□□□ 0.37
MT-ND1P03886 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
MT-ND1P03886 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MT-ND1P03886 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.34■□□□□ 0.37
MT-ND1P03886 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.34■□□□□ 0.37
MT-ND1P03886 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms