Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CHRNA1P02708 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHRNA1P02708 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHRNA1P02708 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHRNA1P02708 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.96■□□□□ 0.79
CHRNA1P02708 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHRNA1P02708 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHRNA1P02708 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.95■□□□□ 0.78
CHRNA1P02708 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHRNA1P02708 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHRNA1P02708 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHRNA1P02708 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHRNA1P02708 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHRNA1P02708 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.95■□□□□ 0.78
CHRNA1P02708 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHRNA1P02708 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHRNA1P02708 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CHRNA1P02708 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHRNA1P02708 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHRNA1P02708 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHRNA1P02708 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHRNA1P02708 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.95■□□□□ 0.78
CHRNA1P02708 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
CHRNA1P02708 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CHRNA1P02708 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.95■□□□□ 0.78
CHRNA1P02708 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.95■□□□□ 0.78
CHRNA1P02708 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.95■□□□□ 0.78
CHRNA1P02708 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHRNA1P02708 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHRNA1P02708 AL671883.3-201ENST00000603274 991 ntBASIC19.95■□□□□ 0.78
CHRNA1P02708 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.95■□□□□ 0.78
CHRNA1P02708 AC120114.3-201ENST00000611923 658 ntBASIC19.95■□□□□ 0.78
CHRNA1P02708 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHRNA1P02708 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.95■□□□□ 0.78
CHRNA1P02708 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHRNA1P02708 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHRNA1P02708 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHRNA1P02708 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.95■□□□□ 0.78
CHRNA1P02708 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHRNA1P02708 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CHRNA1P02708 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHRNA1P02708 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHRNA1P02708 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRNA1P02708 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRNA1P02708 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.94■□□□□ 0.78
CHRNA1P02708 AC116562.4-201ENST00000641316 2276 ntBASIC19.94■□□□□ 0.78
CHRNA1P02708 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRNA1P02708 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRNA1P02708 AL590627.1-203ENST00000421194 1026 ntBASIC19.94■□□□□ 0.78
CHRNA1P02708 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.94■□□□□ 0.78
CHRNA1P02708 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.94■□□□□ 0.78
CHRNA1P02708 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRNA1P02708 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.94■□□□□ 0.78
CHRNA1P02708 AC148477.8-201ENST00000624298 468 ntBASIC19.94■□□□□ 0.78
CHRNA1P02708 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRNA1P02708 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRNA1P02708 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
CHRNA1P02708 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRNA1P02708 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.94■□□□□ 0.78
CHRNA1P02708 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRNA1P02708 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CHRNA1P02708 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.94■□□□□ 0.78
CHRNA1P02708 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRNA1P02708 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHRNA1P02708 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CHRNA1P02708 TP73-AS1-210ENST00000637775 1455 ntBASIC19.93■□□□□ 0.78
CHRNA1P02708 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHRNA1P02708 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHRNA1P02708 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHRNA1P02708 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHRNA1P02708 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CHRNA1P02708 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHRNA1P02708 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHRNA1P02708 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHRNA1P02708 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.93■□□□□ 0.78
CHRNA1P02708 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CHRNA1P02708 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.93■□□□□ 0.78
CHRNA1P02708 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHRNA1P02708 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CHRNA1P02708 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.93■□□□□ 0.78
CHRNA1P02708 AC064862.7-201ENST00000604520 867 ntBASIC19.93■□□□□ 0.78
CHRNA1P02708 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHRNA1P02708 AC023511.2-201ENST00000618803 211 ntBASIC19.93■□□□□ 0.78
CHRNA1P02708 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.93■□□□□ 0.78
CHRNA1P02708 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CHRNA1P02708 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHRNA1P02708 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.93■□□□□ 0.78
CHRNA1P02708 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHRNA1P02708 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.93■□□□□ 0.78
CHRNA1P02708 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA1P02708 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA1P02708 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA1P02708 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA1P02708 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA1P02708 LINC01126-201ENST00000623515 1646 ntBASIC19.92■□□□□ 0.78
CHRNA1P02708 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA1P02708 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA1P02708 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
CHRNA1P02708 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.92■□□□□ 0.78
CHRNA1P02708 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms