Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
HLA-DQA1P01909 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 CALM3-202ENST00000391918 702 ntTSL 2 BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 MYCNOS-205ENST00000641950 531 ntBASIC13.84□□□□□ -0.19
HLA-DQA1P01909 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 LINC00602-201ENST00000629776 2065 ntBASIC13.84□□□□□ -0.19
HLA-DQA1P01909 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HLA-DQA1P01909 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
HLA-DQA1P01909 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
HLA-DQA1P01909 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.19
HLA-DQA1P01909 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
HLA-DQA1P01909 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
HLA-DQA1P01909 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
HLA-DQA1P01909 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.19
HLA-DQA1P01909 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC13.83□□□□□ -0.19
HLA-DQA1P01909 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
HLA-DQA1P01909 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.83□□□□□ -0.2
HLA-DQA1P01909 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA1P01909 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA1P01909 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA1P01909 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
HLA-DQA1P01909 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.83□□□□□ -0.2
HLA-DQA1P01909 HEIH-201ENST00000623091 1652 ntBASIC13.83□□□□□ -0.2
HLA-DQA1P01909 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA1P01909 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA1P01909 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA1P01909 STX7-201ENST00000367937 1090 ntTSL 5 BASIC13.83□□□□□ -0.2
HLA-DQA1P01909 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
HLA-DQA1P01909 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA1P01909 BMP1-204ENST00000397814 836 ntTSL 4 BASIC13.83□□□□□ -0.2
HLA-DQA1P01909 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
HLA-DQA1P01909 KRT18P11-201ENST00000435214 1283 ntBASIC13.83□□□□□ -0.2
HLA-DQA1P01909 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA1P01909 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA1P01909 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA1P01909 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC13.83□□□□□ -0.2
HLA-DQA1P01909 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC13.83□□□□□ -0.2
HLA-DQA1P01909 SPI1-203ENST00000533030 661 ntTSL 2 BASIC13.83□□□□□ -0.2
HLA-DQA1P01909 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC13.83□□□□□ -0.2
HLA-DQA1P01909 AC105020.6-201ENST00000621523 1217 ntBASIC13.83□□□□□ -0.2
HLA-DQA1P01909 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
HLA-DQA1P01909 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA1P01909 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA1P01909 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.83□□□□□ -0.2
HLA-DQA1P01909 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA1P01909 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.83□□□□□ -0.2
HLA-DQA1P01909 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA1P01909 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA1P01909 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA1P01909 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA1P01909 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA1P01909 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
HLA-DQA1P01909 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA1P01909 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.83□□□□□ -0.2
HLA-DQA1P01909 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HLA-DQA1P01909 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.83□□□□□ -0.2
HLA-DQA1P01909 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
HLA-DQA1P01909 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQA1P01909 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQA1P01909 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQA1P01909 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC13.82□□□□□ -0.2
HLA-DQA1P01909 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
HLA-DQA1P01909 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HLA-DQA1P01909 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms