Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.37■□□□□ 0.37
CLPTM1O96005 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.37■□□□□ 0.37
CLPTM1O96005 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLPTM1O96005 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.36■□□□□ 0.37
CLPTM1O96005 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLPTM1O96005 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
CLPTM1O96005 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLPTM1O96005 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLPTM1O96005 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLPTM1O96005 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.36■□□□□ 0.37
CLPTM1O96005 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLPTM1O96005 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.36■□□□□ 0.37
CLPTM1O96005 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.36■□□□□ 0.37
CLPTM1O96005 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLPTM1O96005 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.36■□□□□ 0.37
CLPTM1O96005 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.36■□□□□ 0.37
CLPTM1O96005 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLPTM1O96005 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.36■□□□□ 0.37
CLPTM1O96005 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.36■□□□□ 0.37
CLPTM1O96005 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLPTM1O96005 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CLPTM1O96005 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
CLPTM1O96005 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.36■□□□□ 0.37
CLPTM1O96005 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
CLPTM1O96005 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLPTM1O96005 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLPTM1O96005 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLPTM1O96005 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLPTM1O96005 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLPTM1O96005 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.36■□□□□ 0.37
CLPTM1O96005 PP12613-201ENST00000424958 2230 ntBASIC17.36■□□□□ 0.37
CLPTM1O96005 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.36■□□□□ 0.37
CLPTM1O96005 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CLPTM1O96005 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
CLPTM1O96005 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLPTM1O96005 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.36■□□□□ 0.37
CLPTM1O96005 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.36■□□□□ 0.37
CLPTM1O96005 SDHAP1-207ENST00000440850 2000 ntBASIC17.35■□□□□ 0.37
CLPTM1O96005 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLPTM1O96005 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLPTM1O96005 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLPTM1O96005 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.35■□□□□ 0.37
CLPTM1O96005 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLPTM1O96005 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
CLPTM1O96005 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLPTM1O96005 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.35■□□□□ 0.37
CLPTM1O96005 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.35■□□□□ 0.37
CLPTM1O96005 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CLPTM1O96005 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLPTM1O96005 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.35■□□□□ 0.37
CLPTM1O96005 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.35■□□□□ 0.37
CLPTM1O96005 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLPTM1O96005 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CLPTM1O96005 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.35■□□□□ 0.37
CLPTM1O96005 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.35■□□□□ 0.37
CLPTM1O96005 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.35■□□□□ 0.37
CLPTM1O96005 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLPTM1O96005 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.35■□□□□ 0.37
CLPTM1O96005 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.35■□□□□ 0.37
CLPTM1O96005 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLPTM1O96005 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLPTM1O96005 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLPTM1O96005 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLPTM1O96005 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CLPTM1O96005 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLPTM1O96005 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLPTM1O96005 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLPTM1O96005 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLPTM1O96005 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLPTM1O96005 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CLPTM1O96005 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLPTM1O96005 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
CLPTM1O96005 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLPTM1O96005 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLPTM1O96005 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.35■□□□□ 0.37
CLPTM1O96005 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLPTM1O96005 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.35■□□□□ 0.37
CLPTM1O96005 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.35■□□□□ 0.37
CLPTM1O96005 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.34■□□□□ 0.37
CLPTM1O96005 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLPTM1O96005 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLPTM1O96005 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLPTM1O96005 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLPTM1O96005 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.34■□□□□ 0.37
CLPTM1O96005 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLPTM1O96005 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLPTM1O96005 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLPTM1O96005 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
CLPTM1O96005 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.34■□□□□ 0.37
CLPTM1O96005 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLPTM1O96005 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLPTM1O96005 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLPTM1O96005 HLA-G-202ENST00000376815 851 ntBASIC17.34■□□□□ 0.37
CLPTM1O96005 HLA-G-203ENST00000376818 1127 ntBASIC17.34■□□□□ 0.37
CLPTM1O96005 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.34■□□□□ 0.37
CLPTM1O96005 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CLPTM1O96005 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLPTM1O96005 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.34■□□□□ 0.37
CLPTM1O96005 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLPTM1O96005 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms