Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AL157888.1-201ENST00000631930 593 ntBASIC16.97■□□□□ 0.31
NKX2-2O95096 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NKX2-2O95096 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.97■□□□□ 0.31
NKX2-2O95096 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NKX2-2O95096 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
NKX2-2O95096 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NKX2-2O95096 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NKX2-2O95096 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
NKX2-2O95096 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
NKX2-2O95096 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NKX2-2O95096 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NKX2-2O95096 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NKX2-2O95096 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
NKX2-2O95096 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NKX2-2O95096 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
NKX2-2O95096 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.97■□□□□ 0.31
NKX2-2O95096 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NKX2-2O95096 PHGDH-209ENST00000641074 1780 ntBASIC16.97■□□□□ 0.31
NKX2-2O95096 AL024508.2-201ENST00000607749 1894 ntBASIC16.97■□□□□ 0.31
NKX2-2O95096 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NKX2-2O95096 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NKX2-2O95096 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NKX2-2O95096 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.96■□□□□ 0.31
NKX2-2O95096 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NKX2-2O95096 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
NKX2-2O95096 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NKX2-2O95096 LINC01126-201ENST00000623515 1646 ntBASIC16.96■□□□□ 0.31
NKX2-2O95096 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NKX2-2O95096 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NKX2-2O95096 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NKX2-2O95096 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NKX2-2O95096 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NKX2-2O95096 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NKX2-2O95096 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NKX2-2O95096 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.96■□□□□ 0.31
NKX2-2O95096 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.96■□□□□ 0.31
NKX2-2O95096 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
NKX2-2O95096 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
NKX2-2O95096 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.96■□□□□ 0.31
NKX2-2O95096 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NKX2-2O95096 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.96■□□□□ 0.31
NKX2-2O95096 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NKX2-2O95096 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NKX2-2O95096 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NKX2-2O95096 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NKX2-2O95096 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
NKX2-2O95096 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
NKX2-2O95096 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
NKX2-2O95096 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.96■□□□□ 0.3
NKX2-2O95096 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.96■□□□□ 0.3
NKX2-2O95096 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.96■□□□□ 0.3
NKX2-2O95096 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
NKX2-2O95096 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
NKX2-2O95096 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
NKX2-2O95096 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.96■□□□□ 0.3
NKX2-2O95096 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
NKX2-2O95096 AC020763.4-201ENST00000623414 4170 ntBASIC16.96■□□□□ 0.3
NKX2-2O95096 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.96■□□□□ 0.3
NKX2-2O95096 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
NKX2-2O95096 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
NKX2-2O95096 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.95■□□□□ 0.3
NKX2-2O95096 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.95■□□□□ 0.3
NKX2-2O95096 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NKX2-2O95096 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
NKX2-2O95096 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.95■□□□□ 0.3
NKX2-2O95096 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NKX2-2O95096 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.95■□□□□ 0.3
NKX2-2O95096 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NKX2-2O95096 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NKX2-2O95096 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NKX2-2O95096 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NKX2-2O95096 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NKX2-2O95096 PVRIG2P-201ENST00000435460 978 ntBASIC16.95■□□□□ 0.3
NKX2-2O95096 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NKX2-2O95096 AC034232.1-201ENST00000506026 1064 ntBASIC16.95■□□□□ 0.3
NKX2-2O95096 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.95■□□□□ 0.3
NKX2-2O95096 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
NKX2-2O95096 AL441883.1-201ENST00000566170 1045 ntBASIC16.95■□□□□ 0.3
NKX2-2O95096 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.95■□□□□ 0.3
NKX2-2O95096 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
NKX2-2O95096 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NKX2-2O95096 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NKX2-2O95096 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
NKX2-2O95096 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NKX2-2O95096 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NKX2-2O95096 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.95■□□□□ 0.3
NKX2-2O95096 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NKX2-2O95096 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NKX2-2O95096 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NKX2-2O95096 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
NKX2-2O95096 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NKX2-2O95096 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
NKX2-2O95096 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NKX2-2O95096 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NKX2-2O95096 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
NKX2-2O95096 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.94■□□□□ 0.3
NKX2-2O95096 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.94■□□□□ 0.3
NKX2-2O95096 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.94■□□□□ 0.3
NKX2-2O95096 AC139887.4-201ENST00000607877 719 ntBASIC16.94■□□□□ 0.3
NKX2-2O95096 AC011558.1-201ENST00000623459 338 ntBASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms