Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
BEST1O76090 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.67
BEST1O76090 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
BEST1O76090 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
BEST1O76090 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
BEST1O76090 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BEST1O76090 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BEST1O76090 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.26■□□□□ 0.67
BEST1O76090 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
BEST1O76090 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.26■□□□□ 0.67
BEST1O76090 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.26■□□□□ 0.67
BEST1O76090 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BEST1O76090 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
BEST1O76090 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BEST1O76090 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BEST1O76090 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BEST1O76090 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BEST1O76090 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BEST1O76090 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BEST1O76090 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BEST1O76090 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BEST1O76090 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BEST1O76090 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BEST1O76090 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.26■□□□□ 0.67
BEST1O76090 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BEST1O76090 AL390719.2-201ENST00000606993 987 ntBASIC19.26■□□□□ 0.67
BEST1O76090 AC069148.1-201ENST00000608741 768 ntBASIC19.26■□□□□ 0.67
BEST1O76090 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BEST1O76090 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BEST1O76090 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
BEST1O76090 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BEST1O76090 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BEST1O76090 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BEST1O76090 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BEST1O76090 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.26■□□□□ 0.67
BEST1O76090 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BEST1O76090 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
BEST1O76090 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BEST1O76090 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
BEST1O76090 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BEST1O76090 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BEST1O76090 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BEST1O76090 AC009113.1-201ENST00000570267 2443 ntBASIC19.25■□□□□ 0.67
BEST1O76090 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BEST1O76090 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BEST1O76090 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BEST1O76090 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.25■□□□□ 0.67
BEST1O76090 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
BEST1O76090 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BEST1O76090 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BEST1O76090 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
BEST1O76090 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BEST1O76090 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BEST1O76090 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
BEST1O76090 KRT89P-201ENST00000620027 1478 ntBASIC19.25■□□□□ 0.67
BEST1O76090 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.25■□□□□ 0.67
BEST1O76090 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
BEST1O76090 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BEST1O76090 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
BEST1O76090 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.25■□□□□ 0.67
BEST1O76090 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
BEST1O76090 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
BEST1O76090 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BEST1O76090 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BEST1O76090 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BEST1O76090 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BEST1O76090 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.25■□□□□ 0.67
BEST1O76090 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.24■□□□□ 0.67
BEST1O76090 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
BEST1O76090 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.24■□□□□ 0.67
BEST1O76090 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BEST1O76090 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
BEST1O76090 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
BEST1O76090 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BEST1O76090 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BEST1O76090 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.24■□□□□ 0.67
BEST1O76090 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BEST1O76090 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BEST1O76090 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BEST1O76090 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
BEST1O76090 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
BEST1O76090 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BEST1O76090 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.24■□□□□ 0.67
BEST1O76090 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.24■□□□□ 0.67
BEST1O76090 AP002383.4-201ENST00000442518 975 ntBASIC19.24■□□□□ 0.67
BEST1O76090 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.24■□□□□ 0.67
BEST1O76090 KRT8P26-201ENST00000534154 1276 ntBASIC19.24■□□□□ 0.67
BEST1O76090 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.24■□□□□ 0.67
BEST1O76090 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.24■□□□□ 0.67
BEST1O76090 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.24■□□□□ 0.67
BEST1O76090 GPR32P1-201ENST00000601788 811 ntBASIC19.24■□□□□ 0.67
BEST1O76090 AC004263.2-201ENST00000617183 678 ntBASIC19.24■□□□□ 0.67
BEST1O76090 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.24■□□□□ 0.67
BEST1O76090 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
BEST1O76090 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BEST1O76090 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.24■□□□□ 0.67
BEST1O76090 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BEST1O76090 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BEST1O76090 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BEST1O76090 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms