Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TRIM3O75382 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM3O75382 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM3O75382 YBX1P2-201ENST00000489612 999 ntBASIC17.15■□□□□ 0.34
TRIM3O75382 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM3O75382 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TRIM3O75382 AL031432.5-201ENST00000641059 760 ntBASIC17.15■□□□□ 0.34
TRIM3O75382 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM3O75382 HTR7P1-202ENST00000624664 4411 ntBASIC17.15■□□□□ 0.34
TRIM3O75382 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM3O75382 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM3O75382 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TRIM3O75382 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM3O75382 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM3O75382 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TRIM3O75382 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.34
TRIM3O75382 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM3O75382 CROCCP3-202ENST00000420820 1947 ntBASIC17.14■□□□□ 0.33
TRIM3O75382 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM3O75382 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.14■□□□□ 0.33
TRIM3O75382 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM3O75382 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM3O75382 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM3O75382 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM3O75382 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM3O75382 AC009947.2-201ENST00000444014 672 ntBASIC17.14■□□□□ 0.33
TRIM3O75382 MCCD1P1-208ENST00000445732 328 ntBASIC17.14■□□□□ 0.33
TRIM3O75382 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.14■□□□□ 0.33
TRIM3O75382 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.14■□□□□ 0.33
TRIM3O75382 NEK4P2-201ENST00000580004 1012 ntBASIC17.14■□□□□ 0.33
TRIM3O75382 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM3O75382 AL590326.2-201ENST00000625139 305 ntBASIC17.14■□□□□ 0.33
TRIM3O75382 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM3O75382 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM3O75382 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
TRIM3O75382 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM3O75382 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM3O75382 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.14■□□□□ 0.33
TRIM3O75382 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.14■□□□□ 0.33
TRIM3O75382 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM3O75382 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM3O75382 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM3O75382 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.14■□□□□ 0.33
TRIM3O75382 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM3O75382 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.14■□□□□ 0.33
TRIM3O75382 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.14■□□□□ 0.33
TRIM3O75382 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM3O75382 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.13■□□□□ 0.33
TRIM3O75382 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM3O75382 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
TRIM3O75382 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TRIM3O75382 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM3O75382 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM3O75382 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM3O75382 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM3O75382 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM3O75382 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM3O75382 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM3O75382 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM3O75382 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TRIM3O75382 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM3O75382 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM3O75382 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM3O75382 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM3O75382 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM3O75382 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.13■□□□□ 0.33
TRIM3O75382 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.13■□□□□ 0.33
TRIM3O75382 RNF152P1-201ENST00000397754 604 ntBASIC17.13■□□□□ 0.33
TRIM3O75382 AP000523.1-201ENST00000398242 1049 ntBASIC17.13■□□□□ 0.33
TRIM3O75382 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM3O75382 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.13■□□□□ 0.33
TRIM3O75382 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.13■□□□□ 0.33
TRIM3O75382 AC011558.1-201ENST00000623459 338 ntBASIC17.13■□□□□ 0.33
TRIM3O75382 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM3O75382 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM3O75382 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM3O75382 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM3O75382 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM3O75382 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM3O75382 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.13■□□□□ 0.33
TRIM3O75382 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM3O75382 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
TRIM3O75382 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM3O75382 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM3O75382 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM3O75382 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM3O75382 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM3O75382 KRT8P32-201ENST00000512863 1461 ntBASIC17.12■□□□□ 0.33
TRIM3O75382 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM3O75382 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
TRIM3O75382 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.12■□□□□ 0.33
TRIM3O75382 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM3O75382 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM3O75382 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM3O75382 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.12■□□□□ 0.33
TRIM3O75382 TSPY5P-201ENST00000426936 936 ntBASIC17.12■□□□□ 0.33
TRIM3O75382 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRIM3O75382 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.12■□□□□ 0.33
TRIM3O75382 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.12■□□□□ 0.33
TRIM3O75382 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms