Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CPNE3O75131 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE3O75131 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE3O75131 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE3O75131 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE3O75131 HLA-F-220ENST00000434407 884 ntBASIC17.64■□□□□ 0.41
CPNE3O75131 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE3O75131 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.64■□□□□ 0.41
CPNE3O75131 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CPNE3O75131 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.64■□□□□ 0.41
CPNE3O75131 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE3O75131 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.64■□□□□ 0.41
CPNE3O75131 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.64■□□□□ 0.41
CPNE3O75131 AC011498.5-201ENST00000592027 486 ntBASIC17.64■□□□□ 0.41
CPNE3O75131 AC010240.3-201ENST00000607688 395 ntBASIC17.64■□□□□ 0.41
CPNE3O75131 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.64■□□□□ 0.41
CPNE3O75131 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CPNE3O75131 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE3O75131 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE3O75131 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CPNE3O75131 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE3O75131 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.64■□□□□ 0.41
CPNE3O75131 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE3O75131 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE3O75131 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE3O75131 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.64■□□□□ 0.41
CPNE3O75131 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CPNE3O75131 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CPNE3O75131 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE3O75131 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.63■□□□□ 0.41
CPNE3O75131 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE3O75131 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE3O75131 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.63■□□□□ 0.41
CPNE3O75131 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.63■□□□□ 0.41
CPNE3O75131 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.63■□□□□ 0.41
CPNE3O75131 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.63■□□□□ 0.41
CPNE3O75131 KRT126P-201ENST00000549467 1181 ntBASIC17.63■□□□□ 0.41
CPNE3O75131 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.63■□□□□ 0.41
CPNE3O75131 AL121672.3-201ENST00000608644 468 ntBASIC17.63■□□□□ 0.41
CPNE3O75131 AC079602.3-201ENST00000623931 403 ntBASIC17.63■□□□□ 0.41
CPNE3O75131 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE3O75131 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE3O75131 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE3O75131 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.63■□□□□ 0.41
CPNE3O75131 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE3O75131 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE3O75131 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE3O75131 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.63■□□□□ 0.41
CPNE3O75131 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CPNE3O75131 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CPNE3O75131 AL391807.1-203ENST00000604392 2365 ntBASIC17.62■□□□□ 0.41
CPNE3O75131 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE3O75131 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE3O75131 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE3O75131 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE3O75131 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE3O75131 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.62■□□□□ 0.41
CPNE3O75131 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.62■□□□□ 0.41
CPNE3O75131 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.62■□□□□ 0.41
CPNE3O75131 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE3O75131 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.62■□□□□ 0.41
CPNE3O75131 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CPNE3O75131 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE3O75131 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE3O75131 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.62■□□□□ 0.41
CPNE3O75131 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE3O75131 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE3O75131 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE3O75131 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
CPNE3O75131 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.62■□□□□ 0.41
CPNE3O75131 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE3O75131 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE3O75131 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
CPNE3O75131 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE3O75131 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.62■□□□□ 0.41
CPNE3O75131 BX276092.5-203ENST00000456199 560 ntBASIC17.62■□□□□ 0.41
CPNE3O75131 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CPNE3O75131 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE3O75131 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
CPNE3O75131 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
CPNE3O75131 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.62■□□□□ 0.41
CPNE3O75131 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.62■□□□□ 0.41
CPNE3O75131 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CPNE3O75131 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE3O75131 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPNE3O75131 AL162741.1-201ENST00000565563 1558 ntBASIC17.62■□□□□ 0.41
CPNE3O75131 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE3O75131 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.61■□□□□ 0.41
CPNE3O75131 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CPNE3O75131 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE3O75131 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE3O75131 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CPNE3O75131 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE3O75131 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPNE3O75131 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CPNE3O75131 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CPNE3O75131 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CPNE3O75131 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.61■□□□□ 0.41
CPNE3O75131 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.61■□□□□ 0.41
CPNE3O75131 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms