Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.46■□□□□ 0.39
SCN2BO60939 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.46■□□□□ 0.39
SCN2BO60939 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.46■□□□□ 0.39
SCN2BO60939 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCN2BO60939 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCN2BO60939 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCN2BO60939 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SCN2BO60939 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SCN2BO60939 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SCN2BO60939 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
SCN2BO60939 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.46■□□□□ 0.38
SCN2BO60939 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCN2BO60939 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCN2BO60939 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCN2BO60939 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCN2BO60939 REXO1L9P-201ENST00000604264 2108 ntBASIC17.45■□□□□ 0.38
SCN2BO60939 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SCN2BO60939 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.45■□□□□ 0.38
SCN2BO60939 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCN2BO60939 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.45■□□□□ 0.38
SCN2BO60939 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SCN2BO60939 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCN2BO60939 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SCN2BO60939 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.45■□□□□ 0.38
SCN2BO60939 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.45■□□□□ 0.38
SCN2BO60939 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.45■□□□□ 0.38
SCN2BO60939 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCN2BO60939 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCN2BO60939 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.45■□□□□ 0.38
SCN2BO60939 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.45■□□□□ 0.38
SCN2BO60939 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.45■□□□□ 0.38
SCN2BO60939 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.45■□□□□ 0.38
SCN2BO60939 AL049637.2-201ENST00000641778 930 ntBASIC17.45■□□□□ 0.38
SCN2BO60939 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCN2BO60939 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.45■□□□□ 0.38
SCN2BO60939 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCN2BO60939 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.45■□□□□ 0.38
SCN2BO60939 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.45■□□□□ 0.38
SCN2BO60939 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCN2BO60939 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCN2BO60939 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SCN2BO60939 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
SCN2BO60939 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.45■□□□□ 0.38
SCN2BO60939 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SCN2BO60939 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.45■□□□□ 0.38
SCN2BO60939 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCN2BO60939 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCN2BO60939 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SCN2BO60939 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCN2BO60939 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCN2BO60939 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SCN2BO60939 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCN2BO60939 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SCN2BO60939 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.44■□□□□ 0.38
SCN2BO60939 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCN2BO60939 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.44■□□□□ 0.38
SCN2BO60939 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.44■□□□□ 0.38
SCN2BO60939 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SCN2BO60939 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCN2BO60939 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCN2BO60939 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCN2BO60939 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.44■□□□□ 0.38
SCN2BO60939 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SCN2BO60939 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
SCN2BO60939 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCN2BO60939 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCN2BO60939 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SCN2BO60939 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SCN2BO60939 PKD1P1-201ENST00000458669 6805 ntBASIC17.44■□□□□ 0.38
SCN2BO60939 AP000997.3-201ENST00000623333 2250 ntBASIC17.44■□□□□ 0.38
SCN2BO60939 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCN2BO60939 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCN2BO60939 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCN2BO60939 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCN2BO60939 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SCN2BO60939 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCN2BO60939 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCN2BO60939 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.43■□□□□ 0.38
SCN2BO60939 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SCN2BO60939 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SCN2BO60939 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SCN2BO60939 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCN2BO60939 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCN2BO60939 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SCN2BO60939 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.43■□□□□ 0.38
SCN2BO60939 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SCN2BO60939 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCN2BO60939 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCN2BO60939 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SCN2BO60939 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SCN2BO60939 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCN2BO60939 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.43■□□□□ 0.38
SCN2BO60939 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.43■□□□□ 0.38
SCN2BO60939 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.43■□□□□ 0.38
SCN2BO60939 MIR3180-5-201ENST00000583743 153 ntBASIC17.43■□□□□ 0.38
SCN2BO60939 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.43■□□□□ 0.38
SCN2BO60939 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.43■□□□□ 0.38
SCN2BO60939 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.43■□□□□ 0.38
SCN2BO60939 AC036111.1-201ENST00000533973 1582 ntBASIC17.43■□□□□ 0.38
SCN2BO60939 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms