Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTNND1O60716 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CTNND1O60716 FAM197Y8-203ENST00000450145 560 ntBASIC21.44■■□□□ 1.02
CTNND1O60716 AC096582.2-201ENST00000510860 516 ntBASIC21.44■■□□□ 1.02
CTNND1O60716 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC21.44■■□□□ 1.02
CTNND1O60716 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC21.44■■□□□ 1.02
CTNND1O60716 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC21.44■■□□□ 1.02
CTNND1O60716 AP001005.1-201ENST00000571755 1248 ntBASIC21.44■■□□□ 1.02
CTNND1O60716 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC21.44■■□□□ 1.02
CTNND1O60716 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CTNND1O60716 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTNND1O60716 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
CTNND1O60716 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTNND1O60716 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CTNND1O60716 AL161938.1-201ENST00000569833 2180 ntBASIC21.44■■□□□ 1.02
CTNND1O60716 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTNND1O60716 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CTNND1O60716 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CTNND1O60716 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTNND1O60716 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTNND1O60716 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CTNND1O60716 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CTNND1O60716 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CTNND1O60716 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTNND1O60716 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.43■■□□□ 1.02
CTNND1O60716 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTNND1O60716 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CTNND1O60716 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CTNND1O60716 MOK-208ENST00000519058 917 ntTSL 2 BASIC21.43■■□□□ 1.02
CTNND1O60716 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC21.43■■□□□ 1.02
CTNND1O60716 AL773604.1-201ENST00000617417 272 ntBASIC21.43■■□□□ 1.02
CTNND1O60716 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC21.43■■□□□ 1.02
CTNND1O60716 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CTNND1O60716 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CTNND1O60716 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTNND1O60716 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTNND1O60716 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC21.43■■□□□ 1.02
CTNND1O60716 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTNND1O60716 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTNND1O60716 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTNND1O60716 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CTNND1O60716 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC21.43■■□□□ 1.02
CTNND1O60716 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTNND1O60716 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.43■■□□□ 1.02
CTNND1O60716 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CTNND1O60716 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.42■■□□□ 1.02
CTNND1O60716 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CTNND1O60716 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC21.42■■□□□ 1.02
CTNND1O60716 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
CTNND1O60716 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.42■■□□□ 1.02
CTNND1O60716 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CTNND1O60716 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CTNND1O60716 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CTNND1O60716 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC21.42■■□□□ 1.02
CTNND1O60716 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC21.42■■□□□ 1.02
CTNND1O60716 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
CTNND1O60716 AC068472.1-201ENST00000474589 881 ntBASIC21.42■■□□□ 1.02
CTNND1O60716 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CTNND1O60716 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
CTNND1O60716 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CTNND1O60716 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC21.42■■□□□ 1.02
CTNND1O60716 GPALPP1-207ENST00000611650 899 ntBASIC21.42■■□□□ 1.02
CTNND1O60716 AC006538.3-201ENST00000612495 578 ntBASIC21.42■■□□□ 1.02
CTNND1O60716 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CTNND1O60716 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CTNND1O60716 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.42■■□□□ 1.02
CTNND1O60716 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTNND1O60716 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CTNND1O60716 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CTNND1O60716 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTNND1O60716 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC21.41■■□□□ 1.02
CTNND1O60716 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC21.41■■□□□ 1.02
CTNND1O60716 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.41■■□□□ 1.02
CTNND1O60716 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTNND1O60716 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTNND1O60716 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTNND1O60716 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTNND1O60716 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC21.41■■□□□ 1.02
CTNND1O60716 KRT18P67-201ENST00000432816 1264 ntBASIC21.41■■□□□ 1.02
CTNND1O60716 AC132008.2-207ENST00000454517 770 ntBASIC21.41■■□□□ 1.02
CTNND1O60716 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC21.41■■□□□ 1.02
CTNND1O60716 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC21.41■■□□□ 1.02
CTNND1O60716 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC21.41■■□□□ 1.02
CTNND1O60716 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC21.41■■□□□ 1.02
CTNND1O60716 AL671883.3-201ENST00000603274 991 ntBASIC21.41■■□□□ 1.02
CTNND1O60716 NME4-212ENST00000621774 904 ntTSL 3 BASIC21.41■■□□□ 1.02
CTNND1O60716 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTNND1O60716 SDHAP2-201ENST00000455183 2001 ntBASIC21.41■■□□□ 1.02
CTNND1O60716 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CTNND1O60716 AFG3L1P-217ENST00000557444 2447 ntBASIC21.4■■□□□ 1.02
CTNND1O60716 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.4■■□□□ 1.02
CTNND1O60716 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CTNND1O60716 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CTNND1O60716 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
CTNND1O60716 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.4■■□□□ 1.02
CTNND1O60716 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CTNND1O60716 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CTNND1O60716 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.4■■□□□ 1.02
CTNND1O60716 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CTNND1O60716 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms