Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TRAF3IP2O43734 AC073508.3-201ENST00000619697 1419 ntBASIC16.39■□□□□ 0.21
TRAF3IP2O43734 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF3IP2O43734 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF3IP2O43734 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF3IP2O43734 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAF3IP2O43734 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAF3IP2O43734 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAF3IP2O43734 ATP5G1P1-201ENST00000448724 379 ntBASIC16.39■□□□□ 0.21
TRAF3IP2O43734 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAF3IP2O43734 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAF3IP2O43734 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAF3IP2O43734 LINC01023-201ENST00000606054 436 ntBASIC16.39■□□□□ 0.21
TRAF3IP2O43734 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.39■□□□□ 0.21
TRAF3IP2O43734 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF3IP2O43734 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF3IP2O43734 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
TRAF3IP2O43734 AL354751.1-201ENST00000412768 1863 ntBASIC16.39■□□□□ 0.21
TRAF3IP2O43734 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF3IP2O43734 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF3IP2O43734 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAF3IP2O43734 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF3IP2O43734 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAF3IP2O43734 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF3IP2O43734 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF3IP2O43734 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAF3IP2O43734 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF3IP2O43734 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAF3IP2O43734 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAF3IP2O43734 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAF3IP2O43734 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
TRAF3IP2O43734 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAF3IP2O43734 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAF3IP2O43734 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TRAF3IP2O43734 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TRAF3IP2O43734 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAF3IP2O43734 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAF3IP2O43734 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAF3IP2O43734 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAF3IP2O43734 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAF3IP2O43734 AL137013.1-201ENST00000432946 1228 ntBASIC16.38■□□□□ 0.21
TRAF3IP2O43734 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAF3IP2O43734 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.38■□□□□ 0.21
TRAF3IP2O43734 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.38■□□□□ 0.21
TRAF3IP2O43734 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAF3IP2O43734 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAF3IP2O43734 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAF3IP2O43734 AL023973.1-201ENST00000624619 620 ntBASIC16.38■□□□□ 0.21
TRAF3IP2O43734 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TRAF3IP2O43734 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAF3IP2O43734 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRAF3IP2O43734 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAF3IP2O43734 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAF3IP2O43734 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAF3IP2O43734 ESPNP-201ENST00000270691 2015 ntBASIC16.38■□□□□ 0.21
TRAF3IP2O43734 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAF3IP2O43734 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAF3IP2O43734 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAF3IP2O43734 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
TRAF3IP2O43734 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAF3IP2O43734 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAF3IP2O43734 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRAF3IP2O43734 AC135776.1-201ENST00000319817 2481 ntBASIC16.37■□□□□ 0.21
TRAF3IP2O43734 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAF3IP2O43734 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAF3IP2O43734 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAF3IP2O43734 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAF3IP2O43734 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
TRAF3IP2O43734 AC005521.1-201ENST00000393351 872 ntBASIC16.37■□□□□ 0.21
TRAF3IP2O43734 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.37■□□□□ 0.21
TRAF3IP2O43734 MIR3917-201ENST00000580971 93 ntBASIC16.37■□□□□ 0.21
TRAF3IP2O43734 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRAF3IP2O43734 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAF3IP2O43734 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAF3IP2O43734 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.37■□□□□ 0.21
TRAF3IP2O43734 AC092865.7-201ENST00000641832 219 ntBASIC16.37■□□□□ 0.21
TRAF3IP2O43734 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRAF3IP2O43734 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRAF3IP2O43734 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAF3IP2O43734 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAF3IP2O43734 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAF3IP2O43734 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAF3IP2O43734 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAF3IP2O43734 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAF3IP2O43734 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAF3IP2O43734 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAF3IP2O43734 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAF3IP2O43734 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAF3IP2O43734 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAF3IP2O43734 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAF3IP2O43734 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
TRAF3IP2O43734 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAF3IP2O43734 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAF3IP2O43734 AC093677.2-201ENST00000600169 1863 ntBASIC16.36■□□□□ 0.21
TRAF3IP2O43734 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAF3IP2O43734 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAF3IP2O43734 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAF3IP2O43734 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAF3IP2O43734 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAF3IP2O43734 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms