Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LDB2O43679 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LDB2O43679 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
LDB2O43679 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LDB2O43679 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.38■□□□□ 0.53
LDB2O43679 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.38■□□□□ 0.53
LDB2O43679 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
LDB2O43679 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LDB2O43679 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.38■□□□□ 0.53
LDB2O43679 AL137013.1-201ENST00000432946 1228 ntBASIC18.38■□□□□ 0.53
LDB2O43679 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.38■□□□□ 0.53
LDB2O43679 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.38■□□□□ 0.53
LDB2O43679 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LDB2O43679 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.38■□□□□ 0.53
LDB2O43679 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.38■□□□□ 0.53
LDB2O43679 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.38■□□□□ 0.53
LDB2O43679 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LDB2O43679 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
LDB2O43679 AL023973.1-201ENST00000624619 620 ntBASIC18.38■□□□□ 0.53
LDB2O43679 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LDB2O43679 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LDB2O43679 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LDB2O43679 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LDB2O43679 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.38■□□□□ 0.53
LDB2O43679 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LDB2O43679 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
LDB2O43679 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.38■□□□□ 0.53
LDB2O43679 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LDB2O43679 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
LDB2O43679 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LDB2O43679 LINC01126-201ENST00000623515 1646 ntBASIC18.38■□□□□ 0.53
LDB2O43679 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
LDB2O43679 PHGDH-209ENST00000641074 1780 ntBASIC18.37■□□□□ 0.53
LDB2O43679 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LDB2O43679 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
LDB2O43679 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LDB2O43679 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LDB2O43679 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.37■□□□□ 0.53
LDB2O43679 NOC2LP1-202ENST00000452600 2235 ntBASIC18.37■□□□□ 0.53
LDB2O43679 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LDB2O43679 AC005521.1-201ENST00000393351 872 ntBASIC18.37■□□□□ 0.53
LDB2O43679 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LDB2O43679 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.37■□□□□ 0.53
LDB2O43679 ATP5G1P1-201ENST00000448724 379 ntBASIC18.37■□□□□ 0.53
LDB2O43679 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.37■□□□□ 0.53
LDB2O43679 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.37■□□□□ 0.53
LDB2O43679 AC092865.7-201ENST00000641832 219 ntBASIC18.37■□□□□ 0.53
LDB2O43679 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
LDB2O43679 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LDB2O43679 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LDB2O43679 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LDB2O43679 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LDB2O43679 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LDB2O43679 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LDB2O43679 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LDB2O43679 AL024508.2-201ENST00000607749 1894 ntBASIC18.37■□□□□ 0.53
LDB2O43679 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LDB2O43679 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LDB2O43679 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
LDB2O43679 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
LDB2O43679 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LDB2O43679 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LDB2O43679 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
LDB2O43679 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.36■□□□□ 0.53
LDB2O43679 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LDB2O43679 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LDB2O43679 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
LDB2O43679 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
LDB2O43679 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LDB2O43679 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LDB2O43679 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.36■□□□□ 0.53
LDB2O43679 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
LDB2O43679 COX11P1-201ENST00000489116 835 ntBASIC18.36■□□□□ 0.53
LDB2O43679 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LDB2O43679 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.36■□□□□ 0.53
LDB2O43679 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.36■□□□□ 0.53
LDB2O43679 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.36■□□□□ 0.53
LDB2O43679 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.36■□□□□ 0.53
LDB2O43679 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.36■□□□□ 0.53
LDB2O43679 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
LDB2O43679 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
LDB2O43679 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LDB2O43679 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LDB2O43679 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
LDB2O43679 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LDB2O43679 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LDB2O43679 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.36■□□□□ 0.53
LDB2O43679 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LDB2O43679 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
LDB2O43679 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LDB2O43679 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LDB2O43679 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
LDB2O43679 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LDB2O43679 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LDB2O43679 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
LDB2O43679 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LDB2O43679 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
LDB2O43679 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LDB2O43679 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LDB2O43679 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms