Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC25.46■■□□□ 1.67
CHD2O14647 ORC5-208ENST00000626700 344 ntTSL 3 BASIC25.46■■□□□ 1.67
CHD2O14647 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC25.46■■□□□ 1.67
CHD2O14647 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
CHD2O14647 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CHD2O14647 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CHD2O14647 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC25.45■■□□□ 1.67
CHD2O14647 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
CHD2O14647 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CHD2O14647 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC25.45■■□□□ 1.66
CHD2O14647 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
CHD2O14647 SPCS2P1-201ENST00000561636 679 ntBASIC25.45■■□□□ 1.66
CHD2O14647 SDCCAG3P1-201ENST00000589292 1150 ntBASIC25.45■■□□□ 1.66
CHD2O14647 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
CHD2O14647 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
CHD2O14647 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC25.45■■□□□ 1.66
CHD2O14647 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
CHD2O14647 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC25.45■■□□□ 1.66
CHD2O14647 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC25.45■■□□□ 1.66
CHD2O14647 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
CHD2O14647 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CHD2O14647 PON3-203ENST00000427422 894 ntTSL 3 BASIC25.44■■□□□ 1.66
CHD2O14647 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC25.44■■□□□ 1.66
CHD2O14647 KRT18P2-201ENST00000447938 1258 ntBASIC25.44■■□□□ 1.66
CHD2O14647 MSRA-206ENST00000521209 814 ntTSL 3 BASIC25.44■■□□□ 1.66
CHD2O14647 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC25.44■■□□□ 1.66
CHD2O14647 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
CHD2O14647 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CHD2O14647 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
CHD2O14647 SDHAP2-201ENST00000455183 2001 ntBASIC25.44■■□□□ 1.66
CHD2O14647 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CHD2O14647 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC25.44■■□□□ 1.66
CHD2O14647 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC25.44■■□□□ 1.66
CHD2O14647 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC25.44■■□□□ 1.66
CHD2O14647 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC25.44■■□□□ 1.66
CHD2O14647 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CHD2O14647 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CHD2O14647 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CHD2O14647 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC25.44■■□□□ 1.66
CHD2O14647 AL035633.1-201ENST00000406139 838 ntBASIC25.44■■□□□ 1.66
CHD2O14647 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC25.44■■□□□ 1.66
CHD2O14647 MIR1199-201ENST00000621445 119 ntBASIC25.44■■□□□ 1.66
CHD2O14647 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CHD2O14647 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CHD2O14647 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC25.43■■□□□ 1.66
CHD2O14647 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC25.43■■□□□ 1.66
CHD2O14647 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
CHD2O14647 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CHD2O14647 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CHD2O14647 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC25.43■■□□□ 1.66
CHD2O14647 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC25.43■■□□□ 1.66
CHD2O14647 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC25.43■■□□□ 1.66
CHD2O14647 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC25.43■■□□□ 1.66
CHD2O14647 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC25.43■■□□□ 1.66
CHD2O14647 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC25.43■■□□□ 1.66
CHD2O14647 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC25.43■■□□□ 1.66
CHD2O14647 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC25.43■■□□□ 1.66
CHD2O14647 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC25.43■■□□□ 1.66
CHD2O14647 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
CHD2O14647 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC25.42■■□□□ 1.66
CHD2O14647 SOD2-201ENST00000337404 991 ntTSL 2 BASIC25.42■■□□□ 1.66
CHD2O14647 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC25.42■■□□□ 1.66
CHD2O14647 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC25.42■■□□□ 1.66
CHD2O14647 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC25.42■■□□□ 1.66
CHD2O14647 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC25.42■■□□□ 1.66
CHD2O14647 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
CHD2O14647 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
CHD2O14647 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC25.42■■□□□ 1.66
CHD2O14647 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC25.42■■□□□ 1.66
CHD2O14647 KRT18P28-201ENST00000453838 1332 ntBASIC25.42■■□□□ 1.66
CHD2O14647 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CHD2O14647 ATP6V0CP3-201ENST00000417255 467 ntBASIC25.42■■□□□ 1.66
CHD2O14647 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC25.42■■□□□ 1.66
CHD2O14647 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC25.42■■□□□ 1.66
CHD2O14647 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CHD2O14647 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC25.42■■□□□ 1.66
CHD2O14647 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC25.42■■□□□ 1.66
CHD2O14647 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC25.41■■□□□ 1.66
CHD2O14647 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CHD2O14647 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
CHD2O14647 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC25.41■■□□□ 1.66
CHD2O14647 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CHD2O14647 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CHD2O14647 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CHD2O14647 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CHD2O14647 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CHD2O14647 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CHD2O14647 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CHD2O14647 KRT18P65-201ENST00000439811 1286 ntBASIC25.41■■□□□ 1.66
CHD2O14647 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC25.41■■□□□ 1.66
CHD2O14647 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC25.41■■□□□ 1.66
CHD2O14647 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC25.41■■□□□ 1.66
CHD2O14647 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CHD2O14647 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC25.41■■□□□ 1.66
CHD2O14647 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CHD2O14647 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CHD2O14647 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CHD2O14647 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC25.4■■□□□ 1.66
CHD2O14647 SIGLEC16-201ENST00000599858 1437 ntBASIC25.4■■□□□ 1.66
CHD2O14647 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms