Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC23.56■■□□□ 1.36
CHL1O00533 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CHL1O00533 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC23.55■■□□□ 1.36
CHL1O00533 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CHL1O00533 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC23.55■■□□□ 1.36
CHL1O00533 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CHL1O00533 LINC00602-201ENST00000629776 2065 ntBASIC23.55■■□□□ 1.36
CHL1O00533 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CHL1O00533 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CHL1O00533 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC23.55■■□□□ 1.36
CHL1O00533 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
CHL1O00533 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CHL1O00533 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC23.55■■□□□ 1.36
CHL1O00533 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC23.55■■□□□ 1.36
CHL1O00533 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC23.55■■□□□ 1.36
CHL1O00533 DUSP5P1-201ENST00000441325 1139 ntBASIC23.55■■□□□ 1.36
CHL1O00533 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CHL1O00533 GUSBP12-201ENST00000513727 720 ntBASIC23.55■■□□□ 1.36
CHL1O00533 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC23.55■■□□□ 1.36
CHL1O00533 CBFB-203ENST00000561924 584 ntTSL 5 BASIC23.55■■□□□ 1.36
CHL1O00533 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC23.55■■□□□ 1.36
CHL1O00533 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
CHL1O00533 AC124864.1-201ENST00000623408 392 ntBASIC23.55■■□□□ 1.36
CHL1O00533 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CHL1O00533 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CHL1O00533 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC23.55■■□□□ 1.36
CHL1O00533 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CHL1O00533 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CHL1O00533 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC23.55■■□□□ 1.36
CHL1O00533 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CHL1O00533 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CHL1O00533 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CHL1O00533 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC23.54■■□□□ 1.36
CHL1O00533 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CHL1O00533 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CHL1O00533 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC23.54■■□□□ 1.36
CHL1O00533 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHL1O00533 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CHL1O00533 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHL1O00533 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHL1O00533 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHL1O00533 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHL1O00533 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHL1O00533 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHL1O00533 DDT-203ENST00000403754 569 ntTSL 3 BASIC23.54■■□□□ 1.36
CHL1O00533 DDT-206ENST00000430101 573 ntTSL 2 BASIC23.54■■□□□ 1.36
CHL1O00533 AC091607.1-201ENST00000490318 1060 ntBASIC23.54■■□□□ 1.36
CHL1O00533 SKP2-204ENST00000508514 821 ntTSL 3 BASIC23.54■■□□□ 1.36
CHL1O00533 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHL1O00533 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC23.54■■□□□ 1.36
CHL1O00533 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHL1O00533 PHGDH-209ENST00000641074 1780 ntBASIC23.54■■□□□ 1.36
CHL1O00533 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHL1O00533 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
CHL1O00533 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC23.54■■□□□ 1.36
CHL1O00533 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHL1O00533 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHL1O00533 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHL1O00533 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHL1O00533 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHL1O00533 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CHL1O00533 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CHL1O00533 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC23.53■■□□□ 1.36
CHL1O00533 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHL1O00533 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CHL1O00533 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHL1O00533 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
CHL1O00533 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC23.53■■□□□ 1.36
CHL1O00533 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CHL1O00533 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
CHL1O00533 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC23.53■■□□□ 1.36
CHL1O00533 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHL1O00533 KIRREL3-AS3-201ENST00000404882 831 ntBASIC23.53■■□□□ 1.36
CHL1O00533 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC23.53■■□□□ 1.36
CHL1O00533 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
CHL1O00533 TOB2P1-201ENST00000469761 992 ntBASIC23.53■■□□□ 1.36
CHL1O00533 AC068472.1-201ENST00000474589 881 ntBASIC23.53■■□□□ 1.36
CHL1O00533 AP005901.3-202ENST00000581653 237 ntBASIC23.53■■□□□ 1.36
CHL1O00533 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CHL1O00533 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CHL1O00533 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHL1O00533 AC132938.6-201ENST00000623828 1655 ntBASIC23.53■■□□□ 1.36
CHL1O00533 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CHL1O00533 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
CHL1O00533 AC233702.3-201ENST00000578656 1387 ntBASIC23.52■■□□□ 1.36
CHL1O00533 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC23.52■■□□□ 1.36
CHL1O00533 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC23.52■■□□□ 1.36
CHL1O00533 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CHL1O00533 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHL1O00533 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC23.52■■□□□ 1.36
CHL1O00533 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHL1O00533 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHL1O00533 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
CHL1O00533 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CHL1O00533 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CHL1O00533 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
CHL1O00533 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC23.52■■□□□ 1.36
CHL1O00533 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC23.52■■□□□ 1.36
CHL1O00533 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC23.52■■□□□ 1.36
CHL1O00533 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms