Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.53■□□□□ 0.4
PDLIM1O00151 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.53■□□□□ 0.4
PDLIM1O00151 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.53■□□□□ 0.4
PDLIM1O00151 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.53■□□□□ 0.4
PDLIM1O00151 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM1O00151 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PDLIM1O00151 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.52■□□□□ 0.4
PDLIM1O00151 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDLIM1O00151 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.52■□□□□ 0.4
PDLIM1O00151 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDLIM1O00151 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
PDLIM1O00151 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.52■□□□□ 0.4
PDLIM1O00151 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDLIM1O00151 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDLIM1O00151 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDLIM1O00151 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.52■□□□□ 0.4
PDLIM1O00151 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDLIM1O00151 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDLIM1O00151 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PDLIM1O00151 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDLIM1O00151 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
PDLIM1O00151 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDLIM1O00151 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PDLIM1O00151 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PDLIM1O00151 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PDLIM1O00151 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
PDLIM1O00151 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.52■□□□□ 0.4
PDLIM1O00151 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PDLIM1O00151 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.52■□□□□ 0.4
PDLIM1O00151 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PDLIM1O00151 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDLIM1O00151 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.52■□□□□ 0.4
PDLIM1O00151 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.52■□□□□ 0.4
PDLIM1O00151 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDLIM1O00151 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PDLIM1O00151 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.52■□□□□ 0.4
PDLIM1O00151 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PDLIM1O00151 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PDLIM1O00151 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PDLIM1O00151 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PDLIM1O00151 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PDLIM1O00151 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PDLIM1O00151 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
PDLIM1O00151 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
PDLIM1O00151 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PDLIM1O00151 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDLIM1O00151 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDLIM1O00151 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDLIM1O00151 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PDLIM1O00151 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDLIM1O00151 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDLIM1O00151 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.51■□□□□ 0.39
PDLIM1O00151 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PDLIM1O00151 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.51■□□□□ 0.39
PDLIM1O00151 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDLIM1O00151 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDLIM1O00151 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDLIM1O00151 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.51■□□□□ 0.39
PDLIM1O00151 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PDLIM1O00151 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
PDLIM1O00151 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDLIM1O00151 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDLIM1O00151 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDLIM1O00151 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDLIM1O00151 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDLIM1O00151 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.51■□□□□ 0.39
PDLIM1O00151 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.51■□□□□ 0.39
PDLIM1O00151 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
PDLIM1O00151 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.51■□□□□ 0.39
PDLIM1O00151 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.51■□□□□ 0.39
PDLIM1O00151 RN7SL471P-201ENST00000580476 299 ntBASIC17.51■□□□□ 0.39
PDLIM1O00151 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.51■□□□□ 0.39
PDLIM1O00151 MTDHP1-201ENST00000605323 784 ntBASIC17.51■□□□□ 0.39
PDLIM1O00151 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDLIM1O00151 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PDLIM1O00151 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PDLIM1O00151 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
PDLIM1O00151 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
PDLIM1O00151 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDLIM1O00151 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDLIM1O00151 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.51■□□□□ 0.39
PDLIM1O00151 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDLIM1O00151 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.51■□□□□ 0.39
PDLIM1O00151 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.51■□□□□ 0.39
PDLIM1O00151 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.51■□□□□ 0.39
PDLIM1O00151 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PDLIM1O00151 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.51■□□□□ 0.39
PDLIM1O00151 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PDLIM1O00151 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PDLIM1O00151 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDLIM1O00151 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDLIM1O00151 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDLIM1O00151 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.51■□□□□ 0.39
PDLIM1O00151 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDLIM1O00151 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDLIM1O00151 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
PDLIM1O00151 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDLIM1O00151 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDLIM1O00151 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDLIM1O00151 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms