Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
HFM1A2PYH4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
HFM1A2PYH4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
HFM1A2PYH4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
HFM1A2PYH4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
HFM1A2PYH4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
HFM1A2PYH4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
HFM1A2PYH4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
HFM1A2PYH4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC27.08■■□□□ 1.93
HFM1A2PYH4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
HFM1A2PYH4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
HFM1A2PYH4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC27.08■■□□□ 1.93
HFM1A2PYH4 BET1L-206ENST00000486280 665 ntTSL 3 BASIC27.08■■□□□ 1.93
HFM1A2PYH4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
HFM1A2PYH4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC27.08■■□□□ 1.93
HFM1A2PYH4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC27.08■■□□□ 1.93
HFM1A2PYH4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC27.08■■□□□ 1.93
HFM1A2PYH4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC27.08■■□□□ 1.93
HFM1A2PYH4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
HFM1A2PYH4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC27.08■■□□□ 1.93
HFM1A2PYH4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
HFM1A2PYH4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
HFM1A2PYH4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC27.08■■□□□ 1.93
HFM1A2PYH4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC27.08■■□□□ 1.93
HFM1A2PYH4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
HFM1A2PYH4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
HFM1A2PYH4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
HFM1A2PYH4 AC026396.1-201ENST00000419388 421 ntBASIC27.07■■□□□ 1.92
HFM1A2PYH4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC27.07■■□□□ 1.92
HFM1A2PYH4 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC27.07■■□□□ 1.92
HFM1A2PYH4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
HFM1A2PYH4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
HFM1A2PYH4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC27.07■■□□□ 1.92
HFM1A2PYH4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC27.07■■□□□ 1.92
HFM1A2PYH4 AC124864.1-201ENST00000623408 392 ntBASIC27.07■■□□□ 1.92
HFM1A2PYH4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC27.07■■□□□ 1.92
HFM1A2PYH4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
HFM1A2PYH4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
HFM1A2PYH4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
HFM1A2PYH4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC27.07■■□□□ 1.92
HFM1A2PYH4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
HFM1A2PYH4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
HFM1A2PYH4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC27.07■■□□□ 1.92
HFM1A2PYH4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC27.07■■□□□ 1.92
HFM1A2PYH4 MIR3652-201ENST00000579335 131 ntBASIC27.07■■□□□ 1.92
HFM1A2PYH4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
HFM1A2PYH4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
HFM1A2PYH4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
HFM1A2PYH4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC27.06■■□□□ 1.92
HFM1A2PYH4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
HFM1A2PYH4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC27.06■■□□□ 1.92
HFM1A2PYH4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC27.06■■□□□ 1.92
HFM1A2PYH4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
HFM1A2PYH4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC27.06■■□□□ 1.92
HFM1A2PYH4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
HFM1A2PYH4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
HFM1A2PYH4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
HFM1A2PYH4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC27.06■■□□□ 1.92
HFM1A2PYH4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC27.06■■□□□ 1.92
HFM1A2PYH4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
HFM1A2PYH4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
HFM1A2PYH4 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC27.06■■□□□ 1.92
HFM1A2PYH4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
HFM1A2PYH4 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC27.06■■□□□ 1.92
HFM1A2PYH4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC27.06■■□□□ 1.92
HFM1A2PYH4 AC093677.2-201ENST00000600169 1863 ntBASIC27.06■■□□□ 1.92
HFM1A2PYH4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
HFM1A2PYH4 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC27.06■■□□□ 1.92
HFM1A2PYH4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
HFM1A2PYH4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC27.05■■□□□ 1.92
HFM1A2PYH4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC27.05■■□□□ 1.92
HFM1A2PYH4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
HFM1A2PYH4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
HFM1A2PYH4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
HFM1A2PYH4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC27.05■■□□□ 1.92
HFM1A2PYH4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC27.05■■□□□ 1.92
HFM1A2PYH4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
HFM1A2PYH4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
HFM1A2PYH4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
HFM1A2PYH4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
HFM1A2PYH4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
HFM1A2PYH4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC27.05■■□□□ 1.92
HFM1A2PYH4 TSPY12P-201ENST00000421279 868 ntBASIC27.05■■□□□ 1.92
HFM1A2PYH4 KRT17P6-201ENST00000453795 1220 ntBASIC27.05■■□□□ 1.92
HFM1A2PYH4 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC27.05■■□□□ 1.92
HFM1A2PYH4 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
HFM1A2PYH4 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC27.05■■□□□ 1.92
HFM1A2PYH4 IGHV3-41-201ENST00000613121 348 ntBASIC27.05■■□□□ 1.92
HFM1A2PYH4 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC27.05■■□□□ 1.92
HFM1A2PYH4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
HFM1A2PYH4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
HFM1A2PYH4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
HFM1A2PYH4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
HFM1A2PYH4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
HFM1A2PYH4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
HFM1A2PYH4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC27.04■■□□□ 1.92
HFM1A2PYH4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
HFM1A2PYH4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
HFM1A2PYH4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC27.04■■□□□ 1.92
HFM1A2PYH4 NUS1P1-201ENST00000446295 882 ntBASIC27.04■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms