Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TCRBV3S1A0A5B6 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TCRBV3S1A0A5B6 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TCRBV3S1A0A5B6 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TCRBV3S1A0A5B6 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TCRBV3S1A0A5B6 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TCRBV3S1A0A5B6 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.22■□□□□ 0.35
TCRBV3S1A0A5B6 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.22■□□□□ 0.35
TCRBV3S1A0A5B6 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TCRBV3S1A0A5B6 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TCRBV3S1A0A5B6 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.22■□□□□ 0.35
TCRBV3S1A0A5B6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TCRBV3S1A0A5B6 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.22■□□□□ 0.35
TCRBV3S1A0A5B6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TCRBV3S1A0A5B6 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.22■□□□□ 0.35
TCRBV3S1A0A5B6 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.22■□□□□ 0.35
TCRBV3S1A0A5B6 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TCRBV3S1A0A5B6 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.22■□□□□ 0.35
TCRBV3S1A0A5B6 MYC-209ENST00000641252 345 ntBASIC17.22■□□□□ 0.35
TCRBV3S1A0A5B6 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TCRBV3S1A0A5B6 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TCRBV3S1A0A5B6 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TCRBV3S1A0A5B6 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TCRBV3S1A0A5B6 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TCRBV3S1A0A5B6 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
TCRBV3S1A0A5B6 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TCRBV3S1A0A5B6 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TCRBV3S1A0A5B6 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.21■□□□□ 0.35
TCRBV3S1A0A5B6 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.21■□□□□ 0.35
TCRBV3S1A0A5B6 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.21■□□□□ 0.35
TCRBV3S1A0A5B6 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TCRBV3S1A0A5B6 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
TCRBV3S1A0A5B6 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TCRBV3S1A0A5B6 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TCRBV3S1A0A5B6 AL109659.2-201ENST00000606809 1674 ntBASIC17.21■□□□□ 0.35
TCRBV3S1A0A5B6 NBPF21P-201ENST00000425093 1451 ntBASIC17.21■□□□□ 0.35
TCRBV3S1A0A5B6 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TCRBV3S1A0A5B6 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.21■□□□□ 0.35
TCRBV3S1A0A5B6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.21■□□□□ 0.35
TCRBV3S1A0A5B6 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TCRBV3S1A0A5B6 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.21■□□□□ 0.35
TCRBV3S1A0A5B6 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.21■□□□□ 0.35
TCRBV3S1A0A5B6 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.21■□□□□ 0.35
TCRBV3S1A0A5B6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TCRBV3S1A0A5B6 SOX15-203ENST00000570788 1093 ntBASIC17.21■□□□□ 0.35
TCRBV3S1A0A5B6 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TCRBV3S1A0A5B6 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.21■□□□□ 0.35
TCRBV3S1A0A5B6 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.21■□□□□ 0.35
TCRBV3S1A0A5B6 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TCRBV3S1A0A5B6 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.21■□□□□ 0.35
TCRBV3S1A0A5B6 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TCRBV3S1A0A5B6 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TCRBV3S1A0A5B6 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TCRBV3S1A0A5B6 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.21■□□□□ 0.35
TCRBV3S1A0A5B6 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TCRBV3S1A0A5B6 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TCRBV3S1A0A5B6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TCRBV3S1A0A5B6 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.21■□□□□ 0.34
TCRBV3S1A0A5B6 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.21■□□□□ 0.34
TCRBV3S1A0A5B6 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TCRBV3S1A0A5B6 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
TCRBV3S1A0A5B6 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV3S1A0A5B6 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TCRBV3S1A0A5B6 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
TCRBV3S1A0A5B6 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TCRBV3S1A0A5B6 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV3S1A0A5B6 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV3S1A0A5B6 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV3S1A0A5B6 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV3S1A0A5B6 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TCRBV3S1A0A5B6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.2■□□□□ 0.34
TCRBV3S1A0A5B6 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV3S1A0A5B6 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.2■□□□□ 0.34
TCRBV3S1A0A5B6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV3S1A0A5B6 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV3S1A0A5B6 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV3S1A0A5B6 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV3S1A0A5B6 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.2■□□□□ 0.34
TCRBV3S1A0A5B6 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.2■□□□□ 0.34
TCRBV3S1A0A5B6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV3S1A0A5B6 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV3S1A0A5B6 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.2■□□□□ 0.34
TCRBV3S1A0A5B6 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV3S1A0A5B6 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.2■□□□□ 0.34
TCRBV3S1A0A5B6 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV3S1A0A5B6 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.2■□□□□ 0.34
TCRBV3S1A0A5B6 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV3S1A0A5B6 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV3S1A0A5B6 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV3S1A0A5B6 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TCRBV3S1A0A5B6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.2■□□□□ 0.34
TCRBV3S1A0A5B6 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV3S1A0A5B6 AL138688.1-201ENST00000624851 1594 ntBASIC17.19■□□□□ 0.34
TCRBV3S1A0A5B6 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV3S1A0A5B6 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.19■□□□□ 0.34
TCRBV3S1A0A5B6 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV3S1A0A5B6 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV3S1A0A5B6 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV3S1A0A5B6 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV3S1A0A5B6 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms