Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-2A0A0B4J237 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-2A0A0B4J237 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-2A0A0B4J237 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-2A0A0B4J237 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-2A0A0B4J237 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
TRAV8-2A0A0B4J237 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC14□□□□□ -0.17
TRAV8-2A0A0B4J237 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-2A0A0B4J237 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14□□□□□ -0.17
TRAV8-2A0A0B4J237 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-2A0A0B4J237 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-2A0A0B4J237 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-2A0A0B4J237 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-2A0A0B4J237 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC14□□□□□ -0.17
TRAV8-2A0A0B4J237 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TRAV8-2A0A0B4J237 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC14□□□□□ -0.17
TRAV8-2A0A0B4J237 RPS2P55-201ENST00000397318 883 ntBASIC14□□□□□ -0.17
TRAV8-2A0A0B4J237 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC14□□□□□ -0.17
TRAV8-2A0A0B4J237 MFAP1P1-201ENST00000442257 1255 ntBASIC14□□□□□ -0.17
TRAV8-2A0A0B4J237 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-2A0A0B4J237 FDX2-206ENST00000492239 773 ntTSL 2 BASIC14□□□□□ -0.17
TRAV8-2A0A0B4J237 AC107956.1-201ENST00000494359 873 ntBASIC14□□□□□ -0.17
TRAV8-2A0A0B4J237 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC14□□□□□ -0.17
TRAV8-2A0A0B4J237 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRAV8-2A0A0B4J237 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC14□□□□□ -0.17
TRAV8-2A0A0B4J237 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC14□□□□□ -0.17
TRAV8-2A0A0B4J237 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-2A0A0B4J237 AC068880.1-201ENST00000507289 2297 ntBASIC14□□□□□ -0.17
TRAV8-2A0A0B4J237 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC14□□□□□ -0.17
TRAV8-2A0A0B4J237 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TRAV8-2A0A0B4J237 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-2A0A0B4J237 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-2A0A0B4J237 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-2A0A0B4J237 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC14□□□□□ -0.17
TRAV8-2A0A0B4J237 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV8-2A0A0B4J237 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC14□□□□□ -0.17
TRAV8-2A0A0B4J237 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 ABHD17AP1-201ENST00000358206 933 ntBASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 BUB3-202ENST00000368859 667 ntTSL 3 BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 MIR564-202ENST00000385049 94 ntBASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 GCSHP5-201ENST00000443090 522 ntBASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 MCCD1P1-208ENST00000445732 328 ntBASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 REXO2-216ENST00000544196 452 ntTSL 3 BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 AC113410.3-201ENST00000623366 203 ntBASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 AC093677.2-201ENST00000600169 1863 ntBASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV8-2A0A0B4J237 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV8-2A0A0B4J237 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV8-2A0A0B4J237 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC13.98□□□□□ -0.17
TRAV8-2A0A0B4J237 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV8-2A0A0B4J237 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TRAV8-2A0A0B4J237 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV8-2A0A0B4J237 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV8-2A0A0B4J237 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV8-2A0A0B4J237 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV8-2A0A0B4J237 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV8-2A0A0B4J237 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV8-2A0A0B4J237 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV8-2A0A0B4J237 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV8-2A0A0B4J237 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV8-2A0A0B4J237 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV8-2A0A0B4J237 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TRAV8-2A0A0B4J237 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV8-2A0A0B4J237 AL158047.1-201ENST00000445918 881 ntBASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms