Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCN10AQ9Y5Y9 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SCN10AQ9Y5Y9 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCN10AQ9Y5Y9 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCN10AQ9Y5Y9 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCN10AQ9Y5Y9 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SCN10AQ9Y5Y9 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
SCN10AQ9Y5Y9 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.11■□□□□ 0.81
SCN10AQ9Y5Y9 AL499627.1-201ENST00000569373 2188 ntBASIC20.11■□□□□ 0.81
SCN10AQ9Y5Y9 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.11■□□□□ 0.81
SCN10AQ9Y5Y9 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.11■□□□□ 0.81
SCN10AQ9Y5Y9 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.11■□□□□ 0.81
SCN10AQ9Y5Y9 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.11■□□□□ 0.81
SCN10AQ9Y5Y9 AC132008.2-207ENST00000454517 770 ntBASIC20.11■□□□□ 0.81
SCN10AQ9Y5Y9 PGAM5P1-201ENST00000518923 814 ntBASIC20.11■□□□□ 0.81
SCN10AQ9Y5Y9 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
SCN10AQ9Y5Y9 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.11■□□□□ 0.81
SCN10AQ9Y5Y9 MTDHP3-201ENST00000594186 672 ntBASIC20.11■□□□□ 0.81
SCN10AQ9Y5Y9 AC011467.2-201ENST00000598425 242 ntBASIC20.11■□□□□ 0.81
SCN10AQ9Y5Y9 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.11■□□□□ 0.81
SCN10AQ9Y5Y9 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
SCN10AQ9Y5Y9 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.11■□□□□ 0.81
SCN10AQ9Y5Y9 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCN10AQ9Y5Y9 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SCN10AQ9Y5Y9 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
SCN10AQ9Y5Y9 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.1■□□□□ 0.81
SCN10AQ9Y5Y9 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCN10AQ9Y5Y9 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCN10AQ9Y5Y9 KRT18P13-201ENST00000400056 1290 ntBASIC20.1■□□□□ 0.81
SCN10AQ9Y5Y9 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.1■□□□□ 0.81
SCN10AQ9Y5Y9 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.1■□□□□ 0.81
SCN10AQ9Y5Y9 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.1■□□□□ 0.81
SCN10AQ9Y5Y9 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.1■□□□□ 0.81
SCN10AQ9Y5Y9 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCN10AQ9Y5Y9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
SCN10AQ9Y5Y9 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.1■□□□□ 0.81
SCN10AQ9Y5Y9 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
SCN10AQ9Y5Y9 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
SCN10AQ9Y5Y9 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCN10AQ9Y5Y9 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SCN10AQ9Y5Y9 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
SCN10AQ9Y5Y9 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SCN10AQ9Y5Y9 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCN10AQ9Y5Y9 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCN10AQ9Y5Y9 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.1■□□□□ 0.81
SCN10AQ9Y5Y9 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCN10AQ9Y5Y9 MTCL1P1-201ENST00000446207 792 ntBASIC20.1■□□□□ 0.81
SCN10AQ9Y5Y9 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.1■□□□□ 0.81
SCN10AQ9Y5Y9 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.1■□□□□ 0.81
SCN10AQ9Y5Y9 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.1■□□□□ 0.81
SCN10AQ9Y5Y9 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SCN10AQ9Y5Y9 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCN10AQ9Y5Y9 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SCN10AQ9Y5Y9 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SCN10AQ9Y5Y9 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SCN10AQ9Y5Y9 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.09■□□□□ 0.81
SCN10AQ9Y5Y9 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SCN10AQ9Y5Y9 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.09■□□□□ 0.81
SCN10AQ9Y5Y9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
SCN10AQ9Y5Y9 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
SCN10AQ9Y5Y9 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.09■□□□□ 0.81
SCN10AQ9Y5Y9 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SCN10AQ9Y5Y9 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.09■□□□□ 0.81
SCN10AQ9Y5Y9 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.09■□□□□ 0.81
SCN10AQ9Y5Y9 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.09■□□□□ 0.81
SCN10AQ9Y5Y9 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SCN10AQ9Y5Y9 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SCN10AQ9Y5Y9 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SCN10AQ9Y5Y9 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SCN10AQ9Y5Y9 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
SCN10AQ9Y5Y9 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SCN10AQ9Y5Y9 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SCN10AQ9Y5Y9 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SCN10AQ9Y5Y9 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.09■□□□□ 0.81
SCN10AQ9Y5Y9 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SCN10AQ9Y5Y9 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SCN10AQ9Y5Y9 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
SCN10AQ9Y5Y9 AC125634.1-201ENST00000438758 1403 ntBASIC20.08■□□□□ 0.81
SCN10AQ9Y5Y9 ABCD1P5-201ENST00000445663 754 ntBASIC20.08■□□□□ 0.81
SCN10AQ9Y5Y9 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SCN10AQ9Y5Y9 RPL13AP23-201ENST00000480739 586 ntBASIC20.08■□□□□ 0.81
SCN10AQ9Y5Y9 AC009533.2-201ENST00000543664 586 ntBASIC20.08■□□□□ 0.81
SCN10AQ9Y5Y9 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.08■□□□□ 0.81
SCN10AQ9Y5Y9 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.08■□□□□ 0.81
SCN10AQ9Y5Y9 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.08■□□□□ 0.81
SCN10AQ9Y5Y9 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.08■□□□□ 0.81
SCN10AQ9Y5Y9 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.08■□□□□ 0.81
SCN10AQ9Y5Y9 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SCN10AQ9Y5Y9 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SCN10AQ9Y5Y9 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SCN10AQ9Y5Y9 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.08■□□□□ 0.81
SCN10AQ9Y5Y9 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SCN10AQ9Y5Y9 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SCN10AQ9Y5Y9 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SCN10AQ9Y5Y9 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.08■□□□□ 0.8
SCN10AQ9Y5Y9 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SCN10AQ9Y5Y9 LINC01126-201ENST00000623515 1646 ntBASIC20.08■□□□□ 0.8
SCN10AQ9Y5Y9 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SCN10AQ9Y5Y9 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SCN10AQ9Y5Y9 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms