Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC23.16■■□□□ 1.3
RTCBQ9Y3I0 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTCBQ9Y3I0 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC23.16■■□□□ 1.3
RTCBQ9Y3I0 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
RTCBQ9Y3I0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
RTCBQ9Y3I0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTCBQ9Y3I0 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTCBQ9Y3I0 UROS-202ENST00000368778 1556 ntTSL 2 BASIC23.15■■□□□ 1.3
RTCBQ9Y3I0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC23.15■■□□□ 1.3
RTCBQ9Y3I0 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTCBQ9Y3I0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC23.15■■□□□ 1.3
RTCBQ9Y3I0 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTCBQ9Y3I0 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTCBQ9Y3I0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
RTCBQ9Y3I0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC23.15■■□□□ 1.3
RTCBQ9Y3I0 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC23.15■■□□□ 1.3
RTCBQ9Y3I0 MTCL1P1-201ENST00000446207 792 ntBASIC23.15■■□□□ 1.3
RTCBQ9Y3I0 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC23.15■■□□□ 1.3
RTCBQ9Y3I0 NMU-202ENST00000505262 693 ntTSL 3 BASIC23.15■■□□□ 1.3
RTCBQ9Y3I0 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RTCBQ9Y3I0 PNMT-203ENST00000581428 677 ntTSL 2 BASIC23.15■■□□□ 1.3
RTCBQ9Y3I0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
RTCBQ9Y3I0 AC010327.4-202ENST00000591484 748 ntBASIC23.15■■□□□ 1.3
RTCBQ9Y3I0 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC23.15■■□□□ 1.3
RTCBQ9Y3I0 HOTTIP_1.1-201ENST00000620415 57 ntBASIC23.15■■□□□ 1.3
RTCBQ9Y3I0 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC23.15■■□□□ 1.3
RTCBQ9Y3I0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
RTCBQ9Y3I0 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTCBQ9Y3I0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTCBQ9Y3I0 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC23.14■■□□□ 1.3
RTCBQ9Y3I0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC23.14■■□□□ 1.3
RTCBQ9Y3I0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RTCBQ9Y3I0 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RTCBQ9Y3I0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RTCBQ9Y3I0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RTCBQ9Y3I0 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
RTCBQ9Y3I0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RTCBQ9Y3I0 OR7E14P-202ENST00000530490 1290 ntBASIC23.14■■□□□ 1.29
RTCBQ9Y3I0 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC23.14■■□□□ 1.29
RTCBQ9Y3I0 AC012640.2-201ENST00000561606 901 ntBASIC23.14■■□□□ 1.29
RTCBQ9Y3I0 AL139424.1-201ENST00000607572 797 ntBASIC23.14■■□□□ 1.29
RTCBQ9Y3I0 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RTCBQ9Y3I0 AC009154.2-201ENST00000621177 724 ntBASIC23.14■■□□□ 1.29
RTCBQ9Y3I0 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
RTCBQ9Y3I0 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RTCBQ9Y3I0 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC23.14■■□□□ 1.29
RTCBQ9Y3I0 AC125634.1-201ENST00000438758 1403 ntBASIC23.14■■□□□ 1.29
RTCBQ9Y3I0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RTCBQ9Y3I0 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC23.13■■□□□ 1.29
RTCBQ9Y3I0 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RTCBQ9Y3I0 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
RTCBQ9Y3I0 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RTCBQ9Y3I0 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
RTCBQ9Y3I0 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
RTCBQ9Y3I0 RPSAP43-201ENST00000402237 625 ntBASIC23.13■■□□□ 1.29
RTCBQ9Y3I0 IMP4-203ENST00000409935 958 ntTSL 5 BASIC23.13■■□□□ 1.29
RTCBQ9Y3I0 HMGN1P19-201ENST00000436976 333 ntBASIC23.13■■□□□ 1.29
RTCBQ9Y3I0 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC23.13■■□□□ 1.29
RTCBQ9Y3I0 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC23.13■■□□□ 1.29
RTCBQ9Y3I0 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC23.13■■□□□ 1.29
RTCBQ9Y3I0 Z83851.2-201ENST00000609564 659 ntBASIC23.13■■□□□ 1.29
RTCBQ9Y3I0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
RTCBQ9Y3I0 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC23.13■■□□□ 1.29
RTCBQ9Y3I0 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RTCBQ9Y3I0 AL356309.3-201ENST00000624132 1934 ntBASIC23.13■■□□□ 1.29
RTCBQ9Y3I0 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RTCBQ9Y3I0 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
RTCBQ9Y3I0 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RTCBQ9Y3I0 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
RTCBQ9Y3I0 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RTCBQ9Y3I0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RTCBQ9Y3I0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC23.12■■□□□ 1.29
RTCBQ9Y3I0 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC23.12■■□□□ 1.29
RTCBQ9Y3I0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC23.12■■□□□ 1.29
RTCBQ9Y3I0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
RTCBQ9Y3I0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC23.12■■□□□ 1.29
RTCBQ9Y3I0 AIRN-201ENST00000601203 4374 ntBASIC23.12■■□□□ 1.29
RTCBQ9Y3I0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC23.12■■□□□ 1.29
RTCBQ9Y3I0 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
RTCBQ9Y3I0 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
RTCBQ9Y3I0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RTCBQ9Y3I0 RAB17-203ENST00000409576 466 ntTSL 3 BASIC23.12■■□□□ 1.29
RTCBQ9Y3I0 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC23.12■■□□□ 1.29
RTCBQ9Y3I0 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC23.12■■□□□ 1.29
RTCBQ9Y3I0 GPX1P2-201ENST00000429271 606 ntBASIC23.12■■□□□ 1.29
RTCBQ9Y3I0 KRT18P3-201ENST00000451602 1288 ntBASIC23.12■■□□□ 1.29
RTCBQ9Y3I0 RNA5SP415-201ENST00000517246 115 ntBASIC23.12■■□□□ 1.29
RTCBQ9Y3I0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC23.12■■□□□ 1.29
RTCBQ9Y3I0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RTCBQ9Y3I0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
RTCBQ9Y3I0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RTCBQ9Y3I0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.12■■□□□ 1.29
RTCBQ9Y3I0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RTCBQ9Y3I0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RTCBQ9Y3I0 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC23.11■■□□□ 1.29
RTCBQ9Y3I0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
RTCBQ9Y3I0 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RTCBQ9Y3I0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RTCBQ9Y3I0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RTCBQ9Y3I0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms