Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RCL1Q9Y2P8 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.07■□□□□ 0
RCL1Q9Y2P8 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RCL1Q9Y2P8 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
RCL1Q9Y2P8 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RCL1Q9Y2P8 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC15.07■□□□□ 0
RCL1Q9Y2P8 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC15.07■□□□□ 0
RCL1Q9Y2P8 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC15.07■□□□□ 0
RCL1Q9Y2P8 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC15.07■□□□□ 0
RCL1Q9Y2P8 RHOD-202ENST00000532559 538 ntTSL 3 BASIC15.07■□□□□ 0
RCL1Q9Y2P8 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC15.07■□□□□ 0
RCL1Q9Y2P8 PHB2-213ENST00000546111 858 ntTSL 2 BASIC15.07■□□□□ 0
RCL1Q9Y2P8 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC15.07■□□□□ 0
RCL1Q9Y2P8 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
RCL1Q9Y2P8 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC15.07■□□□□ 0
RCL1Q9Y2P8 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.07■□□□□ 0
RCL1Q9Y2P8 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RCL1Q9Y2P8 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RCL1Q9Y2P8 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.07■□□□□ 0
RCL1Q9Y2P8 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RCL1Q9Y2P8 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RCL1Q9Y2P8 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RCL1Q9Y2P8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
RCL1Q9Y2P8 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC15.07■□□□□ 0
RCL1Q9Y2P8 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
RCL1Q9Y2P8 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.06■□□□□ 0
RCL1Q9Y2P8 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RCL1Q9Y2P8 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RCL1Q9Y2P8 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RCL1Q9Y2P8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.06■□□□□ 0
RCL1Q9Y2P8 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.06■□□□□ 0
RCL1Q9Y2P8 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.06■□□□□ 0
RCL1Q9Y2P8 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
RCL1Q9Y2P8 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.06■□□□□ 0
RCL1Q9Y2P8 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
RCL1Q9Y2P8 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.06■□□□□ 0
RCL1Q9Y2P8 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
RCL1Q9Y2P8 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RCL1Q9Y2P8 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.06■□□□□ 0
RCL1Q9Y2P8 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
RCL1Q9Y2P8 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.06■□□□□ 0
RCL1Q9Y2P8 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
RCL1Q9Y2P8 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.06■□□□□ 0
RCL1Q9Y2P8 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC15.06■□□□□ 0
RCL1Q9Y2P8 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
RCL1Q9Y2P8 BX276092.2-201ENST00000417668 665 ntBASIC15.06■□□□□ 0
RCL1Q9Y2P8 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC15.06■□□□□ 0
RCL1Q9Y2P8 KRT18P5-201ENST00000436075 1291 ntBASIC15.06■□□□□ 0
RCL1Q9Y2P8 OR2A1-AS1-201ENST00000462305 773 ntBASIC15.06■□□□□ 0
RCL1Q9Y2P8 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC15.06■□□□□ 0
RCL1Q9Y2P8 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.06■□□□□ 0
RCL1Q9Y2P8 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC15.06■□□□□ 0
RCL1Q9Y2P8 AC133552.2-202ENST00000575694 574 ntBASIC15.06■□□□□ 0
RCL1Q9Y2P8 MDK-213ENST00000617138 635 ntTSL 2 BASIC15.06■□□□□ 0
RCL1Q9Y2P8 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RCL1Q9Y2P8 PP12613-201ENST00000424958 2230 ntBASIC15.06■□□□□ 0
RCL1Q9Y2P8 AD000864.1-201ENST00000624076 2295 ntBASIC15.06■□□□□ 0
RCL1Q9Y2P8 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.06■□□□□ 0
RCL1Q9Y2P8 KRT8P32-201ENST00000512863 1461 ntBASIC15.06■□□□□ 0
RCL1Q9Y2P8 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
RCL1Q9Y2P8 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RCL1Q9Y2P8 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.06■□□□□ 0
RCL1Q9Y2P8 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.06■□□□□ 0
RCL1Q9Y2P8 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RCL1Q9Y2P8 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
RCL1Q9Y2P8 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.06■□□□□ 0
RCL1Q9Y2P8 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.06■□□□□ 0
RCL1Q9Y2P8 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.06■□□□□ 0
RCL1Q9Y2P8 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.06■□□□□ 0
RCL1Q9Y2P8 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.05■□□□□ 0
RCL1Q9Y2P8 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.05■□□□□ 0
RCL1Q9Y2P8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
RCL1Q9Y2P8 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.05■□□□□ 0
RCL1Q9Y2P8 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.05■□□□□ 0
RCL1Q9Y2P8 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
RCL1Q9Y2P8 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.05■□□□□ 0
RCL1Q9Y2P8 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
RCL1Q9Y2P8 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.05■□□□□ 0
RCL1Q9Y2P8 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RCL1Q9Y2P8 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
RCL1Q9Y2P8 ME3-201ENST00000323418 1068 ntTSL 5 BASIC15.05■□□□□ -0
RCL1Q9Y2P8 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC15.05■□□□□ -0
RCL1Q9Y2P8 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
RCL1Q9Y2P8 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.05■□□□□ -0
RCL1Q9Y2P8 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC15.05■□□□□ -0
RCL1Q9Y2P8 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.05■□□□□ -0
RCL1Q9Y2P8 MARS-234ENST00000630571 216 ntTSL 5 BASIC15.05■□□□□ -0
RCL1Q9Y2P8 MARS-235ENST00000630803 183 ntTSL 3 BASIC15.05■□□□□ -0
RCL1Q9Y2P8 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
RCL1Q9Y2P8 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RCL1Q9Y2P8 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC15.05■□□□□ -0
RCL1Q9Y2P8 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
RCL1Q9Y2P8 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
RCL1Q9Y2P8 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
RCL1Q9Y2P8 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RCL1Q9Y2P8 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
RCL1Q9Y2P8 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.05■□□□□ -0
RCL1Q9Y2P8 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RCL1Q9Y2P8 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.05■□□□□ -0
RCL1Q9Y2P8 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms