Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC21.14■□□□□ 0.97
SYNPO2Q9UMS6 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
SYNPO2Q9UMS6 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC21.14■□□□□ 0.97
SYNPO2Q9UMS6 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.14■□□□□ 0.97
SYNPO2Q9UMS6 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SYNPO2Q9UMS6 AC073592.3-201ENST00000625118 1834 ntBASIC21.13■□□□□ 0.97
SYNPO2Q9UMS6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SYNPO2Q9UMS6 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SYNPO2Q9UMS6 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.13■□□□□ 0.97
SYNPO2Q9UMS6 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.13■□□□□ 0.97
SYNPO2Q9UMS6 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SYNPO2Q9UMS6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC21.13■□□□□ 0.97
SYNPO2Q9UMS6 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC21.13■□□□□ 0.97
SYNPO2Q9UMS6 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SYNPO2Q9UMS6 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC21.13■□□□□ 0.97
SYNPO2Q9UMS6 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.13■□□□□ 0.97
SYNPO2Q9UMS6 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.13■□□□□ 0.97
SYNPO2Q9UMS6 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC21.13■□□□□ 0.97
SYNPO2Q9UMS6 AL732292.2-201ENST00000609649 430 ntBASIC21.13■□□□□ 0.97
SYNPO2Q9UMS6 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SYNPO2Q9UMS6 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SYNPO2Q9UMS6 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SYNPO2Q9UMS6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
SYNPO2Q9UMS6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
SYNPO2Q9UMS6 GMCL1P1-201ENST00000463439 1581 ntBASIC21.13■□□□□ 0.97
SYNPO2Q9UMS6 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SYNPO2Q9UMS6 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
SYNPO2Q9UMS6 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.13■□□□□ 0.97
SYNPO2Q9UMS6 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.13■□□□□ 0.97
SYNPO2Q9UMS6 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SYNPO2Q9UMS6 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
SYNPO2Q9UMS6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.12■□□□□ 0.97
SYNPO2Q9UMS6 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SYNPO2Q9UMS6 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.12■□□□□ 0.97
SYNPO2Q9UMS6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SYNPO2Q9UMS6 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
SYNPO2Q9UMS6 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
SYNPO2Q9UMS6 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.12■□□□□ 0.97
SYNPO2Q9UMS6 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SYNPO2Q9UMS6 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.12■□□□□ 0.97
SYNPO2Q9UMS6 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SYNPO2Q9UMS6 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SYNPO2Q9UMS6 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SYNPO2Q9UMS6 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SYNPO2Q9UMS6 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SYNPO2Q9UMS6 AC026396.1-201ENST00000419388 421 ntBASIC21.12■□□□□ 0.97
SYNPO2Q9UMS6 DANCR-204ENST00000444958 709 ntTSL 3 BASIC21.12■□□□□ 0.97
SYNPO2Q9UMS6 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC21.12■□□□□ 0.97
SYNPO2Q9UMS6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SYNPO2Q9UMS6 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SYNPO2Q9UMS6 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
SYNPO2Q9UMS6 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SYNPO2Q9UMS6 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SYNPO2Q9UMS6 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
SYNPO2Q9UMS6 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SYNPO2Q9UMS6 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SYNPO2Q9UMS6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
SYNPO2Q9UMS6 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SYNPO2Q9UMS6 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SYNPO2Q9UMS6 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SYNPO2Q9UMS6 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SYNPO2Q9UMS6 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
SYNPO2Q9UMS6 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC21.11■□□□□ 0.97
SYNPO2Q9UMS6 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC21.11■□□□□ 0.97
SYNPO2Q9UMS6 MTCL1P1-201ENST00000446207 792 ntBASIC21.11■□□□□ 0.97
SYNPO2Q9UMS6 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.11■□□□□ 0.97
SYNPO2Q9UMS6 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC21.11■□□□□ 0.97
SYNPO2Q9UMS6 BNIP3P18-201ENST00000593976 575 ntBASIC21.11■□□□□ 0.97
SYNPO2Q9UMS6 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21.11■□□□□ 0.97
SYNPO2Q9UMS6 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SYNPO2Q9UMS6 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC21.11■□□□□ 0.97
SYNPO2Q9UMS6 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.11■□□□□ 0.97
SYNPO2Q9UMS6 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SYNPO2Q9UMS6 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SYNPO2Q9UMS6 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.11■□□□□ 0.97
SYNPO2Q9UMS6 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
SYNPO2Q9UMS6 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
SYNPO2Q9UMS6 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC21.1■□□□□ 0.97
SYNPO2Q9UMS6 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.1■□□□□ 0.97
SYNPO2Q9UMS6 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SYNPO2Q9UMS6 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
SYNPO2Q9UMS6 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SYNPO2Q9UMS6 MINOS1P3-201ENST00000457048 203 ntBASIC21.1■□□□□ 0.97
SYNPO2Q9UMS6 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SYNPO2Q9UMS6 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC21.1■□□□□ 0.97
SYNPO2Q9UMS6 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SYNPO2Q9UMS6 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SYNPO2Q9UMS6 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.1■□□□□ 0.97
SYNPO2Q9UMS6 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC21.1■□□□□ 0.97
SYNPO2Q9UMS6 IGHV3OR16-7-201ENST00000604106 360 ntBASIC21.1■□□□□ 0.97
SYNPO2Q9UMS6 AC114341.1-201ENST00000618070 349 ntBASIC21.1■□□□□ 0.97
SYNPO2Q9UMS6 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SYNPO2Q9UMS6 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SYNPO2Q9UMS6 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21.1■□□□□ 0.97
SYNPO2Q9UMS6 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC21.1■□□□□ 0.97
SYNPO2Q9UMS6 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.1■□□□□ 0.97
SYNPO2Q9UMS6 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SYNPO2Q9UMS6 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.1■□□□□ 0.97
SYNPO2Q9UMS6 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.09■□□□□ 0.97
SYNPO2Q9UMS6 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms