Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT11Q9UKZ1 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
CNOT11Q9UKZ1 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT11Q9UKZ1 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT11Q9UKZ1 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.71■□□□□ 0.43
CNOT11Q9UKZ1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.71■□□□□ 0.43
CNOT11Q9UKZ1 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT11Q9UKZ1 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CNOT11Q9UKZ1 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
CNOT11Q9UKZ1 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CNOT11Q9UKZ1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT11Q9UKZ1 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT11Q9UKZ1 PCDHA12-202ENST00000613593 2588 ntBASIC17.71■□□□□ 0.43
CNOT11Q9UKZ1 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT11Q9UKZ1 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT11Q9UKZ1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT11Q9UKZ1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.71■□□□□ 0.43
CNOT11Q9UKZ1 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.71■□□□□ 0.43
CNOT11Q9UKZ1 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.71■□□□□ 0.43
CNOT11Q9UKZ1 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.71■□□□□ 0.43
CNOT11Q9UKZ1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.71■□□□□ 0.43
CNOT11Q9UKZ1 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.71■□□□□ 0.43
CNOT11Q9UKZ1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT11Q9UKZ1 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CNOT11Q9UKZ1 AL645608.8-201ENST00000606034 2086 ntBASIC17.71■□□□□ 0.43
CNOT11Q9UKZ1 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT11Q9UKZ1 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT11Q9UKZ1 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT11Q9UKZ1 RCC2P6-201ENST00000526625 1557 ntBASIC17.7■□□□□ 0.42
CNOT11Q9UKZ1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CNOT11Q9UKZ1 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
CNOT11Q9UKZ1 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT11Q9UKZ1 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT11Q9UKZ1 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT11Q9UKZ1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.7■□□□□ 0.42
CNOT11Q9UKZ1 UNC93B2-201ENST00000285383 730 ntBASIC17.7■□□□□ 0.42
CNOT11Q9UKZ1 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT11Q9UKZ1 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.7■□□□□ 0.42
CNOT11Q9UKZ1 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
CNOT11Q9UKZ1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.7■□□□□ 0.42
CNOT11Q9UKZ1 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT11Q9UKZ1 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.7■□□□□ 0.42
CNOT11Q9UKZ1 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.7■□□□□ 0.42
CNOT11Q9UKZ1 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.7■□□□□ 0.42
CNOT11Q9UKZ1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.7■□□□□ 0.42
CNOT11Q9UKZ1 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.7■□□□□ 0.42
CNOT11Q9UKZ1 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT11Q9UKZ1 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.7■□□□□ 0.42
CNOT11Q9UKZ1 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT11Q9UKZ1 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT11Q9UKZ1 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.7■□□□□ 0.42
CNOT11Q9UKZ1 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT11Q9UKZ1 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT11Q9UKZ1 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT11Q9UKZ1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT11Q9UKZ1 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CNOT11Q9UKZ1 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT11Q9UKZ1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT11Q9UKZ1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT11Q9UKZ1 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT11Q9UKZ1 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT11Q9UKZ1 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT11Q9UKZ1 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CNOT11Q9UKZ1 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT11Q9UKZ1 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT11Q9UKZ1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT11Q9UKZ1 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.69■□□□□ 0.42
CNOT11Q9UKZ1 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT11Q9UKZ1 AP000525.1-201ENST00000608286 694 ntBASIC17.69■□□□□ 0.42
CNOT11Q9UKZ1 AC130371.2-201ENST00000619443 611 ntBASIC17.69■□□□□ 0.42
CNOT11Q9UKZ1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT11Q9UKZ1 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT11Q9UKZ1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT11Q9UKZ1 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.69■□□□□ 0.42
CNOT11Q9UKZ1 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNOT11Q9UKZ1 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CNOT11Q9UKZ1 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CNOT11Q9UKZ1 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
CNOT11Q9UKZ1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CNOT11Q9UKZ1 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.69■□□□□ 0.42
CNOT11Q9UKZ1 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CNOT11Q9UKZ1 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.68■□□□□ 0.42
CNOT11Q9UKZ1 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CNOT11Q9UKZ1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CNOT11Q9UKZ1 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT11Q9UKZ1 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.68■□□□□ 0.42
CNOT11Q9UKZ1 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CNOT11Q9UKZ1 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT11Q9UKZ1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CNOT11Q9UKZ1 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.68■□□□□ 0.42
CNOT11Q9UKZ1 AC004951.3-201ENST00000418645 1148 ntBASIC17.68■□□□□ 0.42
CNOT11Q9UKZ1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.68■□□□□ 0.42
CNOT11Q9UKZ1 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT11Q9UKZ1 AC008040.2-201ENST00000461049 708 ntBASIC17.68■□□□□ 0.42
CNOT11Q9UKZ1 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.68■□□□□ 0.42
CNOT11Q9UKZ1 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT11Q9UKZ1 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT11Q9UKZ1 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.68■□□□□ 0.42
CNOT11Q9UKZ1 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNOT11Q9UKZ1 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms