Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
BLOC1S4Q9NUP1 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
BLOC1S4Q9NUP1 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
BLOC1S4Q9NUP1 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BLOC1S4Q9NUP1 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
BLOC1S4Q9NUP1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.47■□□□□ 0.87
BLOC1S4Q9NUP1 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BLOC1S4Q9NUP1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
BLOC1S4Q9NUP1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.47■□□□□ 0.87
BLOC1S4Q9NUP1 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BLOC1S4Q9NUP1 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.47■□□□□ 0.87
BLOC1S4Q9NUP1 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
BLOC1S4Q9NUP1 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
BLOC1S4Q9NUP1 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BLOC1S4Q9NUP1 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
BLOC1S4Q9NUP1 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BLOC1S4Q9NUP1 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BLOC1S4Q9NUP1 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
BLOC1S4Q9NUP1 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.47■□□□□ 0.87
BLOC1S4Q9NUP1 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
BLOC1S4Q9NUP1 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.47■□□□□ 0.87
BLOC1S4Q9NUP1 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.47■□□□□ 0.87
BLOC1S4Q9NUP1 AC009065.1-201ENST00000564055 1225 ntBASIC20.47■□□□□ 0.87
BLOC1S4Q9NUP1 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
BLOC1S4Q9NUP1 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.47■□□□□ 0.87
BLOC1S4Q9NUP1 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.47■□□□□ 0.87
BLOC1S4Q9NUP1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BLOC1S4Q9NUP1 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BLOC1S4Q9NUP1 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.47■□□□□ 0.87
BLOC1S4Q9NUP1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
BLOC1S4Q9NUP1 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.46■□□□□ 0.87
BLOC1S4Q9NUP1 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
BLOC1S4Q9NUP1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BLOC1S4Q9NUP1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BLOC1S4Q9NUP1 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BLOC1S4Q9NUP1 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BLOC1S4Q9NUP1 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
BLOC1S4Q9NUP1 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
BLOC1S4Q9NUP1 SPDYE15P-201ENST00000424157 909 ntBASIC20.46■□□□□ 0.87
BLOC1S4Q9NUP1 AC104076.2-201ENST00000448912 469 ntBASIC20.46■□□□□ 0.87
BLOC1S4Q9NUP1 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.46■□□□□ 0.87
BLOC1S4Q9NUP1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
BLOC1S4Q9NUP1 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
BLOC1S4Q9NUP1 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.46■□□□□ 0.87
BLOC1S4Q9NUP1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.46■□□□□ 0.87
BLOC1S4Q9NUP1 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
BLOC1S4Q9NUP1 AC140113.3-201ENST00000605663 199 ntBASIC20.46■□□□□ 0.87
BLOC1S4Q9NUP1 AC079602.3-201ENST00000623931 403 ntBASIC20.46■□□□□ 0.87
BLOC1S4Q9NUP1 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
BLOC1S4Q9NUP1 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BLOC1S4Q9NUP1 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
BLOC1S4Q9NUP1 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BLOC1S4Q9NUP1 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BLOC1S4Q9NUP1 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BLOC1S4Q9NUP1 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.46■□□□□ 0.87
BLOC1S4Q9NUP1 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
BLOC1S4Q9NUP1 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
BLOC1S4Q9NUP1 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
BLOC1S4Q9NUP1 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
BLOC1S4Q9NUP1 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
BLOC1S4Q9NUP1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
BLOC1S4Q9NUP1 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
BLOC1S4Q9NUP1 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
BLOC1S4Q9NUP1 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
BLOC1S4Q9NUP1 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
BLOC1S4Q9NUP1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
BLOC1S4Q9NUP1 NOC2LP1-202ENST00000452600 2235 ntBASIC20.45■□□□□ 0.86
BLOC1S4Q9NUP1 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.45■□□□□ 0.86
BLOC1S4Q9NUP1 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
BLOC1S4Q9NUP1 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.45■□□□□ 0.86
BLOC1S4Q9NUP1 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.45■□□□□ 0.86
BLOC1S4Q9NUP1 RASA4DP-201ENST00000460726 1199 ntBASIC20.45■□□□□ 0.86
BLOC1S4Q9NUP1 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.45■□□□□ 0.86
BLOC1S4Q9NUP1 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.45■□□□□ 0.86
BLOC1S4Q9NUP1 RN7SL850P-201ENST00000579959 291 ntBASIC20.45■□□□□ 0.86
BLOC1S4Q9NUP1 AL031432.5-201ENST00000641059 760 ntBASIC20.45■□□□□ 0.86
BLOC1S4Q9NUP1 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
BLOC1S4Q9NUP1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
BLOC1S4Q9NUP1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.45■□□□□ 0.86
BLOC1S4Q9NUP1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
BLOC1S4Q9NUP1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
BLOC1S4Q9NUP1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
BLOC1S4Q9NUP1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
BLOC1S4Q9NUP1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
BLOC1S4Q9NUP1 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
BLOC1S4Q9NUP1 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BLOC1S4Q9NUP1 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.44■□□□□ 0.86
BLOC1S4Q9NUP1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BLOC1S4Q9NUP1 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BLOC1S4Q9NUP1 PVRIG2P-201ENST00000435460 978 ntBASIC20.44■□□□□ 0.86
BLOC1S4Q9NUP1 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.44■□□□□ 0.86
BLOC1S4Q9NUP1 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.44■□□□□ 0.86
BLOC1S4Q9NUP1 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.44■□□□□ 0.86
BLOC1S4Q9NUP1 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.44■□□□□ 0.86
BLOC1S4Q9NUP1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BLOC1S4Q9NUP1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BLOC1S4Q9NUP1 AL096828.2-201ENST00000567259 1965 ntBASIC20.44■□□□□ 0.86
BLOC1S4Q9NUP1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.44■□□□□ 0.86
BLOC1S4Q9NUP1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
BLOC1S4Q9NUP1 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms