Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VPS45Q9NRW7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
VPS45Q9NRW7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS45Q9NRW7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS45Q9NRW7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VPS45Q9NRW7 KRT8P10-201ENST00000450021 1447 ntBASIC18.99■□□□□ 0.63
VPS45Q9NRW7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
VPS45Q9NRW7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VPS45Q9NRW7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VPS45Q9NRW7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS45Q9NRW7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.98■□□□□ 0.63
VPS45Q9NRW7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS45Q9NRW7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VPS45Q9NRW7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
VPS45Q9NRW7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
VPS45Q9NRW7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
VPS45Q9NRW7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
VPS45Q9NRW7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS45Q9NRW7 AL023284.2-201ENST00000405850 579 ntBASIC18.98■□□□□ 0.63
VPS45Q9NRW7 SPDYE15P-201ENST00000424157 909 ntBASIC18.98■□□□□ 0.63
VPS45Q9NRW7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.98■□□□□ 0.63
VPS45Q9NRW7 GPALPP1-207ENST00000611650 899 ntBASIC18.98■□□□□ 0.63
VPS45Q9NRW7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.98■□□□□ 0.63
VPS45Q9NRW7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
VPS45Q9NRW7 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.98■□□□□ 0.63
VPS45Q9NRW7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VPS45Q9NRW7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.98■□□□□ 0.63
VPS45Q9NRW7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.98■□□□□ 0.63
VPS45Q9NRW7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS45Q9NRW7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
VPS45Q9NRW7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
VPS45Q9NRW7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS45Q9NRW7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
VPS45Q9NRW7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
VPS45Q9NRW7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS45Q9NRW7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS45Q9NRW7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.97■□□□□ 0.63
VPS45Q9NRW7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.97■□□□□ 0.63
VPS45Q9NRW7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.97■□□□□ 0.63
VPS45Q9NRW7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
VPS45Q9NRW7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.97■□□□□ 0.63
VPS45Q9NRW7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS45Q9NRW7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
VPS45Q9NRW7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.97■□□□□ 0.63
VPS45Q9NRW7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.97■□□□□ 0.63
VPS45Q9NRW7 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS45Q9NRW7 AL645929.1-201ENST00000420084 975 ntBASIC18.97■□□□□ 0.63
VPS45Q9NRW7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.97■□□□□ 0.63
VPS45Q9NRW7 PVRIG2P-201ENST00000435460 978 ntBASIC18.97■□□□□ 0.63
VPS45Q9NRW7 MCCD1P1-208ENST00000445732 328 ntBASIC18.97■□□□□ 0.63
VPS45Q9NRW7 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.97■□□□□ 0.63
VPS45Q9NRW7 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
VPS45Q9NRW7 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS45Q9NRW7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS45Q9NRW7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VPS45Q9NRW7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS45Q9NRW7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VPS45Q9NRW7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS45Q9NRW7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VPS45Q9NRW7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS45Q9NRW7 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS45Q9NRW7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.97■□□□□ 0.63
VPS45Q9NRW7 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS45Q9NRW7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
VPS45Q9NRW7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.97■□□□□ 0.63
VPS45Q9NRW7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS45Q9NRW7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS45Q9NRW7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS45Q9NRW7 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS45Q9NRW7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
VPS45Q9NRW7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.96■□□□□ 0.63
VPS45Q9NRW7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VPS45Q9NRW7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS45Q9NRW7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
VPS45Q9NRW7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VPS45Q9NRW7 GPAT2P1-201ENST00000444924 1672 ntBASIC18.96■□□□□ 0.63
VPS45Q9NRW7 AL357033.4-201ENST00000617703 1807 ntBASIC18.96■□□□□ 0.63
VPS45Q9NRW7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS45Q9NRW7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS45Q9NRW7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS45Q9NRW7 AP000347.1-202ENST00000435868 847 ntBASIC18.96■□□□□ 0.63
VPS45Q9NRW7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VPS45Q9NRW7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.96■□□□□ 0.63
VPS45Q9NRW7 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
VPS45Q9NRW7 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS45Q9NRW7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VPS45Q9NRW7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VPS45Q9NRW7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.96■□□□□ 0.63
VPS45Q9NRW7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.96■□□□□ 0.63
VPS45Q9NRW7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
VPS45Q9NRW7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS45Q9NRW7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.95■□□□□ 0.62
VPS45Q9NRW7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.95■□□□□ 0.62
VPS45Q9NRW7 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
VPS45Q9NRW7 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.95■□□□□ 0.62
VPS45Q9NRW7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VPS45Q9NRW7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
VPS45Q9NRW7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
VPS45Q9NRW7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.95■□□□□ 0.62
VPS45Q9NRW7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms