Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
EFCC1Q9HA90 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC21.39■■□□□ 1.01
EFCC1Q9HA90 PIN1-206ENST00000587625 878 ntTSL 2 BASIC21.39■■□□□ 1.01
EFCC1Q9HA90 GPR32P1-201ENST00000601788 811 ntBASIC21.39■■□□□ 1.01
EFCC1Q9HA90 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
EFCC1Q9HA90 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC21.39■■□□□ 1.01
EFCC1Q9HA90 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
EFCC1Q9HA90 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
EFCC1Q9HA90 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
EFCC1Q9HA90 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.39■■□□□ 1.01
EFCC1Q9HA90 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
EFCC1Q9HA90 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
EFCC1Q9HA90 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
EFCC1Q9HA90 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
EFCC1Q9HA90 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
EFCC1Q9HA90 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
EFCC1Q9HA90 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.38■■□□□ 1.01
EFCC1Q9HA90 HOXB1-202ENST00000577092 1414 ntBASIC21.38■■□□□ 1.01
EFCC1Q9HA90 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
EFCC1Q9HA90 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
EFCC1Q9HA90 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
EFCC1Q9HA90 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
EFCC1Q9HA90 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.38■■□□□ 1.01
EFCC1Q9HA90 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.38■■□□□ 1.01
EFCC1Q9HA90 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.38■■□□□ 1.01
EFCC1Q9HA90 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
EFCC1Q9HA90 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
EFCC1Q9HA90 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC21.38■■□□□ 1.01
EFCC1Q9HA90 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
EFCC1Q9HA90 AC073648.2-201ENST00000510116 352 ntBASIC21.38■■□□□ 1.01
EFCC1Q9HA90 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC21.38■■□□□ 1.01
EFCC1Q9HA90 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
EFCC1Q9HA90 RPL18-209ENST00000550645 463 ntTSL 5 BASIC21.38■■□□□ 1.01
EFCC1Q9HA90 RPL18-214ENST00000552588 559 ntTSL 3 BASIC21.38■■□□□ 1.01
EFCC1Q9HA90 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC21.38■■□□□ 1.01
EFCC1Q9HA90 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
EFCC1Q9HA90 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
EFCC1Q9HA90 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
EFCC1Q9HA90 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC21.38■■□□□ 1.01
EFCC1Q9HA90 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.38■■□□□ 1.01
EFCC1Q9HA90 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
EFCC1Q9HA90 KRT8P7-201ENST00000533003 1432 ntBASIC21.38■■□□□ 1.01
EFCC1Q9HA90 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
EFCC1Q9HA90 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.37■■□□□ 1.01
EFCC1Q9HA90 ZNF259P1-201ENST00000407656 1365 ntBASIC21.37■■□□□ 1.01
EFCC1Q9HA90 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
EFCC1Q9HA90 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.37■■□□□ 1.01
EFCC1Q9HA90 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
EFCC1Q9HA90 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
EFCC1Q9HA90 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
EFCC1Q9HA90 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
EFCC1Q9HA90 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
EFCC1Q9HA90 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
EFCC1Q9HA90 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
EFCC1Q9HA90 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
EFCC1Q9HA90 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.37■■□□□ 1.01
EFCC1Q9HA90 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC21.37■■□□□ 1.01
EFCC1Q9HA90 IRF8-202ENST00000562492 946 ntTSL 3 BASIC21.37■■□□□ 1.01
EFCC1Q9HA90 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
EFCC1Q9HA90 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC21.37■■□□□ 1.01
EFCC1Q9HA90 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC21.37■■□□□ 1.01
EFCC1Q9HA90 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
EFCC1Q9HA90 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
EFCC1Q9HA90 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
EFCC1Q9HA90 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
EFCC1Q9HA90 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
EFCC1Q9HA90 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
EFCC1Q9HA90 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.36■■□□□ 1.01
EFCC1Q9HA90 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.36■■□□□ 1.01
EFCC1Q9HA90 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EFCC1Q9HA90 AC022898.2-201ENST00000616822 1312 ntBASIC21.36■■□□□ 1.01
EFCC1Q9HA90 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
EFCC1Q9HA90 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
EFCC1Q9HA90 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.36■■□□□ 1.01
EFCC1Q9HA90 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.36■■□□□ 1.01
EFCC1Q9HA90 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
EFCC1Q9HA90 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
EFCC1Q9HA90 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EFCC1Q9HA90 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EFCC1Q9HA90 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.36■■□□□ 1.01
EFCC1Q9HA90 MINOS1P3-201ENST00000457048 203 ntBASIC21.36■■□□□ 1.01
EFCC1Q9HA90 RN7SL606P-201ENST00000472779 293 ntBASIC21.36■■□□□ 1.01
EFCC1Q9HA90 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC21.36■■□□□ 1.01
EFCC1Q9HA90 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
EFCC1Q9HA90 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EFCC1Q9HA90 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.36■■□□□ 1.01
EFCC1Q9HA90 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EFCC1Q9HA90 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.36■■□□□ 1.01
EFCC1Q9HA90 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EFCC1Q9HA90 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
EFCC1Q9HA90 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EFCC1Q9HA90 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EFCC1Q9HA90 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
EFCC1Q9HA90 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
EFCC1Q9HA90 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
EFCC1Q9HA90 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
EFCC1Q9HA90 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EFCC1Q9HA90 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
EFCC1Q9HA90 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
EFCC1Q9HA90 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms