Protein–RNA interactions for Protein: Q9H9D4

ZNF408, Zinc finger protein 408, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF408Q9H9D4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF408Q9H9D4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC21.55■■□□□ 1.04
ZNF408Q9H9D4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF408Q9H9D4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF408Q9H9D4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.55■■□□□ 1.04
ZNF408Q9H9D4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC21.55■■□□□ 1.04
ZNF408Q9H9D4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC21.55■■□□□ 1.04
ZNF408Q9H9D4 RFPL4AP1-201ENST00000530883 850 ntBASIC21.55■■□□□ 1.04
ZNF408Q9H9D4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC21.55■■□□□ 1.04
ZNF408Q9H9D4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC21.55■■□□□ 1.04
ZNF408Q9H9D4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
ZNF408Q9H9D4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC21.55■■□□□ 1.04
ZNF408Q9H9D4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF408Q9H9D4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC21.55■■□□□ 1.04
ZNF408Q9H9D4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC21.55■■□□□ 1.04
ZNF408Q9H9D4 GABARAPL3-202ENST00000624044 1851 ntBASIC21.55■■□□□ 1.04
ZNF408Q9H9D4 FEM1AP3-201ENST00000403722 1741 ntBASIC21.55■■□□□ 1.04
ZNF408Q9H9D4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.55■■□□□ 1.04
ZNF408Q9H9D4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF408Q9H9D4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF408Q9H9D4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC21.54■■□□□ 1.04
ZNF408Q9H9D4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF408Q9H9D4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
ZNF408Q9H9D4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
ZNF408Q9H9D4 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF408Q9H9D4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.54■■□□□ 1.04
ZNF408Q9H9D4 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
ZNF408Q9H9D4 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
ZNF408Q9H9D4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC21.54■■□□□ 1.04
ZNF408Q9H9D4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC21.54■■□□□ 1.04
ZNF408Q9H9D4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC21.54■■□□□ 1.04
ZNF408Q9H9D4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF408Q9H9D4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC21.54■■□□□ 1.04
ZNF408Q9H9D4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF408Q9H9D4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF408Q9H9D4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF408Q9H9D4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
ZNF408Q9H9D4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF408Q9H9D4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF408Q9H9D4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.53■■□□□ 1.04
ZNF408Q9H9D4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.53■■□□□ 1.04
ZNF408Q9H9D4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
ZNF408Q9H9D4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF408Q9H9D4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF408Q9H9D4 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF408Q9H9D4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
ZNF408Q9H9D4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
ZNF408Q9H9D4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC21.53■■□□□ 1.04
ZNF408Q9H9D4 AP006288.1-201ENST00000446065 395 ntBASIC21.53■■□□□ 1.04
ZNF408Q9H9D4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC21.53■■□□□ 1.04
ZNF408Q9H9D4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC21.53■■□□□ 1.04
ZNF408Q9H9D4 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC21.53■■□□□ 1.04
ZNF408Q9H9D4 AC092364.2-202ENST00000597012 1073 ntBASIC21.53■■□□□ 1.04
ZNF408Q9H9D4 MTDHP4-201ENST00000600287 670 ntBASIC21.53■■□□□ 1.04
ZNF408Q9H9D4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF408Q9H9D4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF408Q9H9D4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF408Q9H9D4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.53■■□□□ 1.04
ZNF408Q9H9D4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.52■■□□□ 1.04
ZNF408Q9H9D4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF408Q9H9D4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
ZNF408Q9H9D4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF408Q9H9D4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC21.52■■□□□ 1.04
ZNF408Q9H9D4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF408Q9H9D4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.52■■□□□ 1.04
ZNF408Q9H9D4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF408Q9H9D4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
ZNF408Q9H9D4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF408Q9H9D4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF408Q9H9D4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF408Q9H9D4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF408Q9H9D4 WDR53-203ENST00000429115 683 ntTSL 2 BASIC21.52■■□□□ 1.04
ZNF408Q9H9D4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC21.52■■□□□ 1.04
ZNF408Q9H9D4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC21.52■■□□□ 1.04
ZNF408Q9H9D4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC21.52■■□□□ 1.04
ZNF408Q9H9D4 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
ZNF408Q9H9D4 AC011467.2-201ENST00000598425 242 ntBASIC21.52■■□□□ 1.04
ZNF408Q9H9D4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC21.52■■□□□ 1.04
ZNF408Q9H9D4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF408Q9H9D4 IRX1P1-201ENST00000438849 1838 ntBASIC21.52■■□□□ 1.04
ZNF408Q9H9D4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF408Q9H9D4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF408Q9H9D4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC21.52■■□□□ 1.03
ZNF408Q9H9D4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
ZNF408Q9H9D4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
ZNF408Q9H9D4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC21.51■■□□□ 1.03
ZNF408Q9H9D4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF408Q9H9D4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF408Q9H9D4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF408Q9H9D4 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF408Q9H9D4 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.51■■□□□ 1.03
ZNF408Q9H9D4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF408Q9H9D4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF408Q9H9D4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF408Q9H9D4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC21.51■■□□□ 1.03
ZNF408Q9H9D4 HTR5BP-201ENST00000430851 1154 ntBASIC21.51■■□□□ 1.03
ZNF408Q9H9D4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF408Q9H9D4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC21.51■■□□□ 1.03
ZNF408Q9H9D4 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC21.51■■□□□ 1.03
ZNF408Q9H9D4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms