Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AL163051.1-201ENST00000569214 1512 ntBASIC18.7■□□□□ 0.58
LRRC40Q9H9A6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC40Q9H9A6 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.7■□□□□ 0.58
LRRC40Q9H9A6 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
LRRC40Q9H9A6 AC026471.1-201ENST00000564629 3026 ntBASIC18.7■□□□□ 0.58
LRRC40Q9H9A6 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC40Q9H9A6 MMP23A-201ENST00000234610 1017 ntBASIC18.7■□□□□ 0.58
LRRC40Q9H9A6 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC40Q9H9A6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC40Q9H9A6 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
LRRC40Q9H9A6 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC40Q9H9A6 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC40Q9H9A6 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.7■□□□□ 0.58
LRRC40Q9H9A6 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
LRRC40Q9H9A6 AC093677.2-201ENST00000600169 1863 ntBASIC18.7■□□□□ 0.58
LRRC40Q9H9A6 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
LRRC40Q9H9A6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC40Q9H9A6 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
LRRC40Q9H9A6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.7■□□□□ 0.58
LRRC40Q9H9A6 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC40Q9H9A6 CYP2D8P-201ENST00000433633 1490 ntBASIC18.7■□□□□ 0.58
LRRC40Q9H9A6 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
LRRC40Q9H9A6 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
LRRC40Q9H9A6 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
LRRC40Q9H9A6 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC40Q9H9A6 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.69■□□□□ 0.58
LRRC40Q9H9A6 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LRRC40Q9H9A6 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LRRC40Q9H9A6 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRRC40Q9H9A6 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
LRRC40Q9H9A6 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
LRRC40Q9H9A6 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRRC40Q9H9A6 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.69■□□□□ 0.58
LRRC40Q9H9A6 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
LRRC40Q9H9A6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.69■□□□□ 0.58
LRRC40Q9H9A6 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LRRC40Q9H9A6 KRT8P9-201ENST00000558927 1449 ntBASIC18.69■□□□□ 0.58
LRRC40Q9H9A6 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRRC40Q9H9A6 AC093827.2-201ENST00000512654 315 ntBASIC18.69■□□□□ 0.58
LRRC40Q9H9A6 AC010947.1-201ENST00000623454 693 ntBASIC18.69■□□□□ 0.58
LRRC40Q9H9A6 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.69■□□□□ 0.58
LRRC40Q9H9A6 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.69■□□□□ 0.58
LRRC40Q9H9A6 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRRC40Q9H9A6 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LRRC40Q9H9A6 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LRRC40Q9H9A6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LRRC40Q9H9A6 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 ESPNP-201ENST00000270691 2015 ntBASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 MIR149-201ENST00000384879 89 ntBASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 AC112497.1-201ENST00000624824 639 ntBASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 AC009102.3-201ENST00000623118 1491 ntBASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 GMCL1P1-201ENST00000463439 1581 ntBASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC40Q9H9A6 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC40Q9H9A6 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC40Q9H9A6 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC40Q9H9A6 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC40Q9H9A6 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.67■□□□□ 0.58
LRRC40Q9H9A6 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.67■□□□□ 0.58
LRRC40Q9H9A6 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC40Q9H9A6 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC40Q9H9A6 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.67■□□□□ 0.58
LRRC40Q9H9A6 INGX-201ENST00000359239 846 ntBASIC18.67■□□□□ 0.58
LRRC40Q9H9A6 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC40Q9H9A6 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC40Q9H9A6 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms